Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 AL133477.1-201ENST00000457472 514 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 RPS29P26-201ENST00000477483 171 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 MTND4P33-201ENST00000556706 766 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 H3F3AP1-201ENST00000559984 334 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 SNRPGP15-201ENST00000600149 222 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 RPL23AP92-201ENST00000603609 255 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 MTCO1P23-201ENST00000415223 1526 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 OR5BR1P-201ENST00000524992 1330 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 OR5J1P-201ENST00000313544 939 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 Y_RNA.311-201ENST00000365068 96 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 AL450338.1-201ENST00000407987 512 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 EI24P1-201ENST00000416584 867 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 Z80107.1-201ENST00000436830 412 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 SNORD11.1-201ENST00000459482 85 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 MTND1P16-201ENST00000465177 898 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 MIR4637-201ENST00000582405 84 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 AC138649.5-201ENST00000637456 137 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 RIOK3P1-201ENST00000418778 1528 ntBASIC6.13□□□□□ -1.43
SHROOM4Q9ULL8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 RNU4-82P-201ENST00000362443 140 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 RNU6-821P-201ENST00000390995 107 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 RPS24P12-201ENST00000402084 394 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AL121834.1-202ENST00000404494 277 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AL513174.1-201ENST00000423182 629 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC008264.1-201ENST00000447612 367 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 OFD1P3Y-201ENST00000453312 783 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC110760.3-202ENST00000515177 371 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 MIR2276-201ENST00000516886 89 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AP004242.1-201ENST00000533701 349 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 NBEAP1-201ENST00000554452 979 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 HSPE1P3-201ENST00000559254 309 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC080013.4-201ENST00000607624 649 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC243773.3-201ENST00000613270 256 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC107075.1-201ENST00000613695 314 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 MIR4727-201ENST00000622232 55 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AF117829.1-206ENST00000621883 3802 ntBASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM4Q9ULL8 AC005539.1-201ENST00000443768 1479 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 Y_RNA.408-201ENST00000383987 102 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 RPL7P36-201ENST00000444633 681 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 USP9YP34-201ENST00000453983 808 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AC108729.1-201ENST00000487812 947 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 RNU6-583P-201ENST00000516012 92 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AC013470.4-201ENST00000619978 986 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AC231657.1-201ENST00000624313 397 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 AL672296.1-201ENST00000427780 2158 ntBASIC6.11□□□□□ -1.43
SHROOM4Q9ULL8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 RNA5SP189-201ENST00000364920 115 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 RNU6-878P-201ENST00000384578 110 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 RNU6-1242P-201ENST00000391052 103 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AL356968.1-201ENST00000416622 474 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AL139413.1-201ENST00000421309 217 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms