Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC010374.2-201ENST00000512933 535 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC023632.1-201ENST00000518463 375 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AP003355.1-201ENST00000518956 587 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 OR4R2P-201ENST00000530815 597 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC018630.1-201ENST00000541376 925 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 MTCYBP27-201ENST00000555160 670 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 SNORD84-203ENST00000584275 78 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC055876.5-201ENST00000605667 259 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC120053.1-201ENST00000607706 736 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC007318.2-201ENST00000620999 243 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC095031.1-201ENST00000623685 672 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 HMGB1P5-201ENST00000255320 642 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 MCTS2P-201ENST00000394552 546 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC092447.6-201ENST00000414578 210 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 RAC1P8-201ENST00000427086 527 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC079780.1-201ENST00000428259 207 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AL445669.2-201ENST00000454425 421 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 snoU109.4-201ENST00000458953 143 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 HMGN2P13-201ENST00000476476 274 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC083906.5-201ENST00000503722 328 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC026414.1-201ENST00000504046 698 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 BOLA3P3-201ENST00000505182 232 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 GMPSP1-201ENST00000514075 579 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 MTCO3P27-201ENST00000514397 196 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 RNU6-27P-201ENST00000516146 107 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 SNORA48.10-201ENST00000516965 160 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 snoZ278.1-201ENST00000517059 112 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC008127.2-201ENST00000549925 1075 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC044913.1-201ENST00000557200 430 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 MTND4LP25-201ENST00000570218 163 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC012669.1-201ENST00000603209 283 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AL158211.2-201ENST00000607282 395 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 SGO1P2-201ENST00000429458 1589 ntBASIC3.16□□□□□ -1.9
CDH9Q9ULB4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH9Q9ULB4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
CDH9Q9ULB4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDH9Q9ULB4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CDH9Q9ULB4 SNORA63.3-201ENST00000362682 132 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 RNU6-851P-201ENST00000384565 107 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AC109780.2-201ENST00000413467 845 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 MTCO3P1-205ENST00000422088 832 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 COX6CP18-201ENST00000448769 222 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 MRPL42P4-201ENST00000453267 443 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 RPS23P3-201ENST00000470993 430 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 DYNLL1P6-201ENST00000503440 264 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 OR5G4P-201ENST00000525251 760 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 SNRPGP16-201ENST00000533275 226 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 VN1R87P-201ENST00000596706 487 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 AC006927.2-201ENST00000639256 389 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH9Q9ULB4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms