Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPL7P54-201ENST00000438336 674 ntBASIC2.62□□□□□ -1.99
SCN11AQ9UI33 AC011753.1-201ENST00000451001 220 ntBASIC2.62□□□□□ -1.99
SCN11AQ9UI33 AC008083.2-201ENST00000546707 476 ntBASIC2.62□□□□□ -1.99
SCN11AQ9UI33 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
SCN11AQ9UI33 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN11AQ9UI33 AC093673.2-201ENST00000609674 331 ntBASIC2.62□□□□□ -1.99
SCN11AQ9UI33 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 MIR9-3-201ENST00000385084 90 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 RPL5P19-201ENST00000404228 893 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 RPL38P4-201ENST00000502376 214 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 SNORA31.26-201ENST00000517250 137 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AC005156.1-201ENST00000613371 573 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AL359715.4-201ENST00000606629 1436 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AC107021.2-201ENST00000567714 2095 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 CYCSP49-201ENST00000420810 319 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AL138785.1-201ENST00000425821 331 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 HMGB3P21-201ENST00000452483 547 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AC006270.2-201ENST00000578523 652 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN11AQ9UI33 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AC131280.1-202ENST00000624067 4211 ntBASIC2.61□□□□□ -1.99
SCN11AQ9UI33 AC244517.1-201ENST00000606030 2086 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SCN11AQ9UI33 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCN11AQ9UI33 Y_RNA.355-201ENST00000365462 98 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN11AQ9UI33 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN11AQ9UI33 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN11AQ9UI33 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
SCN11AQ9UI33 FAM92A1P1-201ENST00000528023 890 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN11AQ9UI33 AC131902.3-201ENST00000611767 581 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 AC016542.2-201ENST00000624201 619 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 AC006378.2-201ENST00000623178 2476 ntBASIC2.6□□□□□ -1.99
SCN11AQ9UI33 MIR591-201ENST00000385290 95 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 HMGB1P13-201ENST00000406019 642 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 RNU6-603P-201ENST00000411403 107 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 RAD23BP2-201ENST00000416003 1207 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 HSPE1P28-201ENST00000443139 211 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.59□□□□□ -1.99
SCN11AQ9UI33 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.59□□□□□ -1.99
SCN11AQ9UI33 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN11AQ9UI33 AC110588.1-201ENST00000559699 137 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 AC084757.1-201ENST00000559987 490 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 AC091834.1-201ENST00000614543 472 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
SCN11AQ9UI33 AC004520.1-201ENST00000608362 1413 ntBASIC2.59□□□□□ -1.99
SCN11AQ9UI33 MIR518E-201ENST00000385252 88 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 RNU2-37P-201ENST00000410695 177 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.59□□□□□ -2
SCN11AQ9UI33 SDR42E1P3-201ENST00000438345 502 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 HMGB3P30-201ENST00000457863 606 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 MTND4LP22-201ENST00000508209 276 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 TTC39CP1-201ENST00000512513 755 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.59□□□□□ -2
SCN11AQ9UI33 AC087241.2-201ENST00000535801 324 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.59□□□□□ -2
SCN11AQ9UI33 AC128687.1-201ENST00000605304 619 ntBASIC2.59□□□□□ -2
SCN11AQ9UI33 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.59□□□□□ -2
SCN11AQ9UI33 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SCN11AQ9UI33 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN11AQ9UI33 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SCN11AQ9UI33 RN7SKP226-201ENST00000364912 300 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 LUZP4P1-201ENST00000415420 344 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.58□□□□□ -2
SCN11AQ9UI33 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.58□□□□□ -2
SCN11AQ9UI33 ELOCP10-201ENST00000440624 327 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.58□□□□□ -2
SCN11AQ9UI33 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.58□□□□□ -2
SCN11AQ9UI33 PTGES3P5-201ENST00000455109 434 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 RPS29P11-201ENST00000496507 171 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.58□□□□□ -2
SCN11AQ9UI33 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.58□□□□□ -2
SCN11AQ9UI33 ZNF192P1-203ENST00000565888 810 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.58□□□□□ -2
SCN11AQ9UI33 ISCA1P3-201ENST00000577104 373 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.58□□□□□ -2
SCN11AQ9UI33 AC090953.1-201ENST00000604305 1092 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 ELOCP34-201ENST00000604436 327 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 MFSD8-245ENST00000641743 948 ntBASIC2.58□□□□□ -2
SCN11AQ9UI33 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCN11AQ9UI33 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
SCN11AQ9UI33 Y_RNA.116-201ENST00000363292 103 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 RNU6-1263P-201ENST00000384601 106 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms