Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC88CQ9P219 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 VTRNA1-1-201ENST00000363120 99 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 SNORA7.2-201ENST00000364446 145 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AL354719.1-201ENST00000406535 843 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 PSMA2P3-201ENST00000429685 675 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC010095.1-201ENST00000443543 144 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AL035407.2-201ENST00000454090 378 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 MTCO3P42-201ENST00000509488 518 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 HMGB1P47-201ENST00000511281 589 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 MTCO3P39-201ENST00000514812 518 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC078814.3-201ENST00000553036 491 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 YWHAZP1-201ENST00000556286 722 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC022069.1-201ENST00000582910 658 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 RPL23AP78-201ENST00000599928 470 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 U73479.1-201ENST00000618062 168 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC006020.1-201ENST00000420179 1854 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AP001350.1-201ENST00000601906 1524 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 RPL21P132-201ENST00000331267 462 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 SNORD56.5-201ENST00000364281 72 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 RNU6-670P-201ENST00000364312 104 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 MIR518C-201ENST00000384822 101 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 CKS1BP5-201ENST00000434172 273 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC129850.1-201ENST00000436203 508 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC090515.1-201ENST00000465295 476 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC074029.2-201ENST00000551045 634 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AL163153.1-201ENST00000554223 283 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC88CQ9P219 AC090751.1-201ENST00000566966 267 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
CCDC88CQ9P219 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 HMGN2P21-201ENST00000447764 270 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 snoU13.7-201ENST00000459220 104 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 AIG1P1-201ENST00000503376 148 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 MTND5P4-201ENST00000514978 288 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 AC109635.4-202ENST00000531666 412 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 AC123904.3-201ENST00000547218 814 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 AP000787.2-201ENST00000604432 568 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 HSPE1P14-201ENST00000605812 302 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 VN1R7P-201ENST00000619242 903 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC88CQ9P219 AC104454.1-201ENST00000421341 1401 ntBASIC2.21□□□□□ -2.06
CCDC88CQ9P219 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 HMGB1P10-201ENST00000395823 563 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 RPL23AP47-201ENST00000408017 460 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 OR51A3P-201ENST00000413596 924 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 RPL31P2-201ENST00000413849 377 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC023128.2-201ENST00000420880 1223 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 RPL23AP23-201ENST00000452590 471 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 snoU13.26-201ENST00000459452 105 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 FABP5P6-201ENST00000510588 409 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC105137.2-201ENST00000569073 466 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC090312.2-201ENST00000582687 378 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC004925.1-201ENST00000624256 2706 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AL136164.4-201ENST00000625013 2135 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 MIR142-201ENST00000384835 87 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 MTND4P13-201ENST00000402078 1023 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms