Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 OR10V3P-201ENST00000525712 725 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AP000916.1-201ENST00000533869 835 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AP005205.1-201ENST00000563503 508 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC006539.2-201ENST00000601729 572 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC119501.1-201ENST00000603646 475 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 NUTF2P8-201ENST00000604593 363 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC239803.2-201ENST00000610161 430 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 VN1R9P-201ENST00000614184 867 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC006249.1-201ENST00000621223 471 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 ZNF663P-202ENST00000641770 1131 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC096644.4-201ENST00000563417 2912 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC090740.1-201ENST00000623193 2262 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 RNU5D-1-201ENST00000363299 116 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 SNORD56.5-201ENST00000364281 72 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 RNU6-115P-201ENST00000364310 107 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 RNU6-481P-201ENST00000384194 107 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 RNU6-851P-201ENST00000384565 107 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 RNU4-27P-201ENST00000410889 139 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AL133384.1-201ENST00000412744 351 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 ARL4AP4-201ENST00000434170 518 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 RPL36AP6-201ENST00000435770 321 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AC002542.1-201ENST00000440683 193 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 HSFY3P-201ENST00000444242 1191 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 RNU6-1102P-201ENST00000516149 96 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 ZNF92P2-201ENST00000600543 1059 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AC245389.1-201ENST00000605141 529 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 YPEL5P2-201ENST00000605553 359 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 AC100814.1-201ENST00000606963 623 ntBASIC2.62□□□□□ -1.99
VAPAQ9P0L0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
VAPAQ9P0L0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 RNA5SP374-201ENST00000362939 125 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 RNU6-619P-201ENST00000365146 108 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 SNORA1.3-201ENST00000384676 136 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 RPL23AP74-201ENST00000437246 471 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 UBBP3-201ENST00000445497 241 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 Z96811.1-201ENST00000445880 108 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 OR6K5P-201ENST00000447050 945 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AL589880.1-201ENST00000448271 287 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AL359385.1-201ENST00000456509 365 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AP002812.1-201ENST00000495378 474 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC006390.1-201ENST00000508068 283 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC074250.1-201ENST00000511117 192 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 SCARNA13-201ENST00000516672 275 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC090695.1-201ENST00000561269 1222 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 CYCSP41-201ENST00000616920 296 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC012314.7-201ENST00000619693 93 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AP006248.3-201ENST00000623580 594 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AC091925.2-201ENST00000625059 256 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 AL590396.4-201ENST00000636779 956 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 MFSD8-245ENST00000641743 948 ntBASIC2.61□□□□□ -1.99
VAPAQ9P0L0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms