Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC52A3Q9NQ40 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC52A3Q9NQ40 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 RNU6-501P-201ENST00000364072 100 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 RNU6-339P-201ENST00000384310 107 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 MIR184-201ENST00000384962 84 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 MT-TC-201ENST00000387405 66 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 RNU6-192P-201ENST00000391253 100 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC025750.1-201ENST00000399891 379 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 DEFB108C-201ENST00000400154 252 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 HMGB1P17-201ENST00000403495 628 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 Y_RNA.599-201ENST00000410489 109 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 RPS7P13-201ENST00000413955 498 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 MTCO3P41-201ENST00000414801 328 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 HMGB3P20-201ENST00000417997 600 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL365184.2-201ENST00000431139 435 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL592447.1-201ENST00000447592 540 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 ST13P20-201ENST00000447996 1065 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 OR9M1P-201ENST00000459641 921 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC004801.2-202ENST00000463559 283 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 IGHV3-32-201ENST00000519182 355 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL139174.1-201ENST00000531489 886 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL391156.1-201ENST00000554965 554 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 PCMTD1P2-201ENST00000565017 355 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 MIR4637-201ENST00000582405 84 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC022916.3-201ENST00000592961 742 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC012065.4-201ENST00000602445 679 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC080078.2-201ENST00000603766 501 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC112230.1-201ENST00000604342 547 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AL592436.1-201ENST00000605135 558 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC128687.1-201ENST00000605304 619 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC087752.4-201ENST00000605911 462 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC004492.1-201ENST00000607036 742 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC100793.4-201ENST00000613683 429 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC010678.1-201ENST00000614118 713 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 AC026585.1-201ENST00000619582 524 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 MTND4P16-201ENST00000466108 1367 ntBASIC3.51□□□□□ -1.85
SLC52A3Q9NQ40 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 MTCO1P23-201ENST00000415223 1526 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 RNU4-91P-201ENST00000364778 135 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 SNORA75-201ENST00000384158 137 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 RNU6-1119P-201ENST00000384349 108 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 SNORA48.7-201ENST00000391302 135 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AL121972.1-201ENST00000402023 252 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AL136116.1-201ENST00000403591 381 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AL024474.1-201ENST00000404655 591 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 CDK8P2-201ENST00000415020 547 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 EI24P1-201ENST00000416584 867 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 RPL7P2-201ENST00000427639 268 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 MTND4P6-201ENST00000438297 472 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AC122718.1-201ENST00000439448 744 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 BMI1P1-201ENST00000445879 941 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AC007967.1-201ENST00000455422 1159 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AC099563.1-201ENST00000456086 418 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 snoU13.3-201ENST00000459441 104 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 MEMO1P3-201ENST00000459811 302 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 FAM133DP-201ENST00000464802 691 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 RPL21P129-201ENST00000491732 478 ntBASIC3.5□□□□□ -1.85
SLC52A3Q9NQ40 AC110792.1-201ENST00000491826 472 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms