Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AL163642.2-201ENST00000604722 1019 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AL391497.1-201ENST00000608671 547 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 RPS4XP5-202ENST00000449995 1334 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.84□□□□□ -1.8
POLR1BQ9H9Y6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.84□□□□□ -1.8
POLR1BQ9H9Y6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
POLR1BQ9H9Y6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 SNORA51.2-201ENST00000364595 132 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-629P-201ENST00000384061 103 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 RPS3AP26-201ENST00000398259 784 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC091390.3-201ENST00000426478 338 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AL117351.1-201ENST00000438864 766 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC108734.1-201ENST00000439549 399 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AL831737.1-201ENST00000441288 271 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 OR6C5P-201ENST00000452388 923 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 MTND1P9-201ENST00000453775 944 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC092451.1-201ENST00000480211 153 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 BET1P1-201ENST00000482276 359 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AP001025.2-201ENST00000490908 477 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC034159.1-201ENST00000513885 583 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AP004247.1-201ENST00000531556 1289 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC126177.3-201ENST00000551839 688 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC015726.1-201ENST00000602353 681 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AL109653.1-201ENST00000603091 248 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC013444.2-201ENST00000603317 787 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AL031176.1-201ENST00000604554 466 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC121247.2-201ENST00000604776 136 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC114878.2-201ENST00000604863 1251 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC106028.5-201ENST00000610332 395 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC096577.2-201ENST00000611455 153 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC005344.1-201ENST00000613391 459 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AP005264.7-201ENST00000625003 745 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AP004289.2-201ENST00000444413 1457 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AP001350.1-201ENST00000601906 1524 ntBASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
POLR1BQ9H9Y6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC008725.1-201ENST00000605123 2263 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 RNA5SP97-201ENST00000365006 84 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 RNA5SP235-201ENST00000365411 114 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL356421.1-201ENST00000403255 413 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 SNORA3.3-201ENST00000408712 125 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL390023.1-201ENST00000428836 262 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LSM1P1-201ENST00000438629 273 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL121871.1-201ENST00000443413 436 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 RPS11P1-201ENST00000451072 473 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 NANOGP10-201ENST00000453325 895 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 SNORD121B-201ENST00000458838 81 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC010486.3-201ENST00000511602 785 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 SNORA31.20-201ENST00000517111 133 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AP000889.1-201ENST00000530968 660 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC109635.4-202ENST00000531666 412 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms