Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MIR200C-201ENST00000384980 68 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 CYCSP45-201ENST00000402289 315 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 MTHFD2P2-201ENST00000407725 247 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 HMGB3P20-201ENST00000417997 600 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL137014.1-201ENST00000420490 1226 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL354941.1-201ENST00000438600 464 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 USP9YP10-201ENST00000454868 628 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 RNU7-170P-201ENST00000459303 61 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 RPS27AP1-201ENST00000475545 471 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 MTND2P14-201ENST00000482139 351 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC104685.1-201ENST00000502445 371 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC147055.4-201ENST00000504399 745 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC105914.1-201ENST00000511798 226 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC093677.1-201ENST00000514414 678 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 OR5AP1P-201ENST00000529730 940 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL121766.1-201ENST00000547436 487 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 DUXAP11-201ENST00000603858 526 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL133507.1-201ENST00000605269 557 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL355810.1-201ENST00000614629 552 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AL357080.1-201ENST00000617394 239 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 AC015967.1-201ENST00000619893 476 ntBASIC3.36□□□□□ -1.87
UBQLN3Q9H347 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
UBQLN3Q9H347 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RNU6-931P-201ENST00000363850 107 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 PIGPP2-201ENST00000411569 458 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 OR1AA1P-201ENST00000419597 916 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 EZH2P1-201ENST00000431167 291 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RABEPKP1-201ENST00000440529 1026 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 VN1R34P-201ENST00000447387 883 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RPS3AP46-201ENST00000448352 682 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC104978.1-201ENST00000449387 391 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 SSXP4-201ENST00000451349 245 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL109741.2-201ENST00000455561 343 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC099563.1-201ENST00000456086 418 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RPL23AP31-201ENST00000456160 467 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 snoU13.8-201ENST00000458890 104 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC092754.2-201ENST00000463506 460 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC017015.1-201ENST00000477387 286 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RPS3AP50-201ENST00000487064 803 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 Y_RNA.717-201ENST00000517106 92 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RANP9-201ENST00000519957 271 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC020914.6-201ENST00000594327 272 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC022146.1-201ENST00000595307 847 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL592295.2-201ENST00000612578 206 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL390240.1-201ENST00000612950 384 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL355493.4-201ENST00000618530 292 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL596245.1-201ENST00000618994 362 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 MIR6075-201ENST00000620782 95 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL445264.1-201ENST00000621719 171 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL034408.1-202ENST00000636088 415 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AP000553.6-201ENST00000641242 118 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms