Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AC103783.1-201ENST00000520506 373 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL139174.1-201ENST00000531489 886 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL354943.1-201ENST00000572103 781 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL031281.1-201ENST00000604049 488 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC243773.3-201ENST00000613270 256 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL157817.1-201ENST00000614264 790 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC090116.1-201ENST00000615679 446 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC092650.2-201ENST00000619984 902 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL356321.1-201ENST00000621360 228 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL359715.5-201ENST00000623431 443 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC068647.1-201ENST00000489539 2265 ntBASIC3.9□□□□□ -1.78
ZNF541Q9H0D2 MTCO1P14-201ENST00000441695 1559 ntBASIC3.9□□□□□ -1.78
ZNF541Q9H0D2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.9□□□□□ -1.78
ZNF541Q9H0D2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.9□□□□□ -1.78
ZNF541Q9H0D2 AC095050.2-201ENST00000510748 1458 ntBASIC3.9□□□□□ -1.78
ZNF541Q9H0D2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 XIAPP3-201ENST00000312918 795 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 SNRPEP3-201ENST00000338402 276 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AL024474.1-201ENST00000404655 591 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 RNU6-757P-201ENST00000410334 100 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 RPL7P53-201ENST00000421245 739 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AC005517.2-201ENST00000424673 553 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 SKP1P1-201ENST00000438081 489 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 EXTL2P1-201ENST00000446218 416 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 RPL39P6-201ENST00000448289 150 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 DNAJC19P1-201ENST00000455312 319 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 SNRPGP5-201ENST00000456003 220 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 ACTG1P13-201ENST00000486987 1043 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 MTCYBP17-201ENST00000503579 789 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 XKRY-201ENST00000510392 1100 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 RNU6-583P-201ENST00000516012 92 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 Y_RNA.717-201ENST00000517106 92 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AP001636.2-201ENST00000525517 696 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 LRRC34P1-201ENST00000542742 915 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AL355812.1-201ENST00000603215 216 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AL139286.1-201ENST00000604465 483 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AL355493.4-201ENST00000618530 292 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AP003485.2-201ENST00000623636 610 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 AP000776.1-201ENST00000530032 1663 ntBASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ZNF541Q9H0D2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AL136360.1-201ENST00000503377 1900 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AL390862.1-201ENST00000635467 1469 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 GDI2P1-201ENST00000429312 1336 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 RNU6-1214P-201ENST00000363650 109 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 RNU6-283P-201ENST00000364788 107 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 MIR1261-201ENST00000408659 82 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 RNU4-78P-201ENST00000410940 126 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 USP9YP33-201ENST00000412220 421 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 USP9YP35-201ENST00000435696 412 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 MTND4P6-201ENST00000438297 472 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 SLC31A1P1-201ENST00000451221 567 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC021146.8-201ENST00000507455 733 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AP003461.1-201ENST00000528866 78 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AL389895.1-201ENST00000554127 252 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC007424.1-203ENST00000554613 687 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC087465.1-201ENST00000560574 245 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AL158211.1-201ENST00000566763 763 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AC099489.2-201ENST00000574976 260 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms