Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC104629.1-201ENST00000494226 508 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AP001207.2-201ENST00000519490 539 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC104417.1-201ENST00000523974 751 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC008507.2-201ENST00000588402 1176 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 BNIP3P33-201ENST00000598912 569 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC012443.1-201ENST00000605605 231 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC099785.1-201ENST00000605697 437 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AL356585.4-201ENST00000623078 1229 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC103988.1-201ENST00000566382 2177 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 TRIM60P18-201ENST00000441518 828 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 OR6K5P-201ENST00000447050 945 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC104472.2-201ENST00000469035 601 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC034236.1-201ENST00000469891 373 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 RPS26P21-201ENST00000475397 348 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 OR4G11P-201ENST00000492842 939 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 OR10V3P-201ENST00000525712 725 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 LARP7P2-201ENST00000575306 125 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 BNIP3P24-201ENST00000593398 557 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AL031176.1-201ENST00000604554 466 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AP002826.1-201ENST00000608835 315 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AL592148.2-201ENST00000612210 372 ntBASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.2□□□□□ -1.9
POLR1EQ9GZS1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC011460.1-201ENST00000636268 1834 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 SNORD46.1-201ENST00000364139 104 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 SNORA38.1-201ENST00000364172 131 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 SNORA1.3-201ENST00000384676 136 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC012498.1-201ENST00000424037 437 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC092634.2-201ENST00000428146 1010 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC108734.1-201ENST00000439549 399 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AL590664.1-201ENST00000448065 339 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC111000.2-201ENST00000507775 550 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC008837.1-201ENST00000511513 412 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC055876.1-202ENST00000567053 138 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 MIR5004-201ENST00000579078 107 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC068620.3-201ENST00000602749 560 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AL445435.1-201ENST00000604232 665 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AP001521.1-201ENST00000609150 300 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AC018692.3-201ENST00000623929 123 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 OR4G11P-202ENST00000642116 1414 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 AL513185.3-201ENST00000433335 1300 ntBASIC3.19□□□□□ -1.9
POLR1EQ9GZS1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AL136372.1-201ENST00000403060 228 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms