Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC010378.1-201ENST00000619270 362 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AP000843.1-201ENST00000624880 701 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC008013.2-202ENST00000637965 364 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL442639.1-201ENST00000625030 1899 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 SMG1P4-204ENST00000523028 4131 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 MTND5P30-201ENST00000452896 1731 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC097461.1-201ENST00000568928 2821 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 PANDAR-201ENST00000629595 1506 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 SAMMSON-213ENST00000641336 1521 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 API5P2-201ENST00000397055 1498 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 RNU6-179P-201ENST00000363350 107 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 RNA5SP90-201ENST00000364801 99 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 SNORD116-11-201ENST00000383882 92 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.463-201ENST00000384271 102 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 RNY1P14-201ENST00000384426 108 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 HMGB3P7-201ENST00000400214 611 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL391417.1-201ENST00000404100 426 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 POLHP1-201ENST00000411806 470 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 BX323014.1-201ENST00000412876 237 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 ATG3P1-201ENST00000419507 911 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC093162.1-201ENST00000419682 124 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 RPS27P18-201ENST00000431701 247 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 SNAP23P1-201ENST00000433229 246 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC092451.1-201ENST00000480211 153 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC004453.1-201ENST00000487895 408 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC018797.3-201ENST00000513388 1241 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 RNU6-1213P-201ENST00000517075 94 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC100784.1-201ENST00000522790 310 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 OR4P1P-201ENST00000530808 1136 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC092747.3-201ENST00000603769 301 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL162431.4-201ENST00000604674 411 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC133644.2-201ENST00000608142 540 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL627230.1-201ENST00000613077 211 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 U2.1-201ENST00000618978 145 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC073136.1-201ENST00000449426 2884 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 CDC27P3-201ENST00000635418 1910 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC023421.1-201ENST00000590535 1785 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 THAP12P4-201ENST00000528321 2266 ntBASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.32□□□□□ -1.72
SSBP3Q9BWW4 AC092376.2-201ENST00000622621 4116 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 KPNA2P1-201ENST00000458289 1591 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms