Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 SEM1P1-201ENST00000506694 209 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COPS4Q9BT78 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AC074250.1-201ENST00000511117 192 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 MTND5P4-201ENST00000514978 288 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 RNU6-27P-201ENST00000516146 107 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 RNU6-1095P-201ENST00000516148 108 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AP001804.3-201ENST00000525146 880 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AP000916.1-201ENST00000533869 835 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 NIFKP8-201ENST00000560500 874 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 AC138761.3-201ENST00000579993 334 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 MIR4429-201ENST00000580105 73 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 VN1R9P-201ENST00000614184 867 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 AL355493.4-201ENST00000618530 292 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AC091953.5-201ENST00000622919 233 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 AC106730.3-201ENST00000624568 641 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 ZNF663P-202ENST00000641770 1131 ntBASIC2.62□□□□□ -1.99
COPS4Q9BT78 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COPS4Q9BT78 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 AC138915.1-201ENST00000565427 1685 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 SNORA63.1-201ENST00000362493 131 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 RNU5D-1-201ENST00000363299 116 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 SNORA38.1-201ENST00000364172 131 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COPS4Q9BT78 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 AL136372.1-201ENST00000403060 228 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 AL133384.1-201ENST00000412744 351 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 BX682237.1-201ENST00000415016 335 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 AC008173.1-201ENST00000418901 264 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 HMGN2P30-201ENST00000423237 256 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 RN7SL807P-201ENST00000470923 297 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 RN7SL504P-201ENST00000494496 287 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COPS4Q9BT78 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.61□□□□□ -1.99
COPS4Q9BT78 MIR6075-201ENST00000620782 95 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 AC026422.1-201ENST00000623961 452 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 AC091925.2-201ENST00000625059 256 ntBASIC2.61□□□□□ -1.99
COPS4Q9BT78 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COPS4Q9BT78 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 SNORA71.1-201ENST00000364523 117 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
COPS4Q9BT78 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 RNU4-27P-201ENST00000410889 139 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC092638.1-201ENST00000411966 1275 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AL158050.1-201ENST00000416077 457 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 MRPL50P4-201ENST00000446432 475 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 TPRKBP1-201ENST00000456243 481 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 GTF2IP12-201ENST00000456547 356 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 CDC42P1-201ENST00000456658 548 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC034236.1-201ENST00000469891 373 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COPS4Q9BT78 SETP11-201ENST00000473027 690 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AIG1P1-201ENST00000503376 148 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC009901.1-201ENST00000506703 541 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC109471.1-201ENST00000511631 612 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 AL133271.1-201ENST00000538229 291 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 NBEAP1-201ENST00000554452 979 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 MIR5004-201ENST00000579078 107 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 GAS5-AS1-201ENST00000602767 694 ntBASIC2.6□□□□□ -1.99
COPS4Q9BT78 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COPS4Q9BT78 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
COPS4Q9BT78 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.59□□□□□ -1.99
COPS4Q9BT78 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COPS4Q9BT78 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COPS4Q9BT78 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
COPS4Q9BT78 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
COPS4Q9BT78 RNU6-115P-201ENST00000364310 107 ntBASIC2.59□□□□□ -1.99
COPS4Q9BT78 AL512633.1-201ENST00000399931 655 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms