Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 ARF4P3-201ENST00000397387 509 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AL136310.1-201ENST00000404926 654 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 MTCO2P21-201ENST00000419780 677 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 USP9YP24-201ENST00000434374 697 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 USP9YP22-201ENST00000438971 294 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 HSPE1P28-201ENST00000443139 211 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 USP9YP17-201ENST00000444617 696 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 NPM1P49-201ENST00000448027 714 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AL589880.1-201ENST00000448271 287 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 snoU13.3-201ENST00000459441 104 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC005410.1-202ENST00000460347 485 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC008155.2-201ENST00000464337 397 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC010301.1-201ENST00000473936 355 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC091951.3-201ENST00000504093 246 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 RNU6-311P-201ENST00000516224 102 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 RNU6-1225P-201ENST00000516336 65 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 RNU6-1261P-201ENST00000517194 104 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AP000619.3-201ENST00000535634 1127 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AADACP1-206ENST00000561502 1193 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC009097.3-201ENST00000563557 1018 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AL139344.1-201ENST00000605228 195 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AL513477.2-201ENST00000607858 568 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 AL020991.1-201ENST00000612314 373 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 MTND5P7-201ENST00000413558 1798 ntBASIC2.94□□□□□ -1.94
EBF4Q9BQW3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
EBF4Q9BQW3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 SNORD116.1-201ENST00000365628 92 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 MT-TC-201ENST00000387405 66 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 ERHP2-201ENST00000402323 299 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 MTND4LP20-201ENST00000402379 270 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AL357075.1-201ENST00000404107 726 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 RNU4-78P-201ENST00000410940 126 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 RPL7P8-201ENST00000411964 730 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AL133384.1-201ENST00000412744 351 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 HIGD1AP15-201ENST00000416198 280 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 MRPS36P1-201ENST00000421291 307 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC244098.2-201ENST00000422068 99 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 HMGN2P20-201ENST00000437531 273 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 EEF1A1P39-201ENST00000440791 250 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AL034418.1-201ENST00000448675 860 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 ZNF886P-201ENST00000450781 723 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC104308.1-201ENST00000454621 333 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 USP9YP25-201ENST00000457708 443 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 PNPLA4P1-201ENST00000458328 305 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC011979.1-201ENST00000472300 483 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 RPS27AP1-201ENST00000475545 471 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC108734.3-201ENST00000481241 1165 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC092593.2-201ENST00000513866 913 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 TRMT10BP1-201ENST00000519377 943 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.93□□□□□ -1.94
EBF4Q9BQW3 MIR3160-1-201ENST00000577972 85 ntBASIC2.93□□□□□ -1.94
EBF4Q9BQW3 AC010928.3-201ENST00000587712 541 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms