Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMOQ99835 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.38□□□□□ -1.71
SMOQ99835 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.38□□□□□ -1.71
SMOQ99835 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.38□□□□□ -1.71
SMOQ99835 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
SMOQ99835 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMOQ99835 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SMOQ99835 RNU5E-1-201ENST00000362477 120 ntBASIC4.38□□□□□ -1.71
SMOQ99835 RNY4P14-201ENST00000363656 96 ntBASIC4.38□□□□□ -1.71
SMOQ99835 RNU4-1-201ENST00000363925 141 ntBASIC4.38□□□□□ -1.71
SMOQ99835 RNA5SP515-201ENST00000364570 118 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SMOQ99835 RPL23AP32-201ENST00000395315 459 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC127391.1-201ENST00000411737 98 ntBASIC4.38□□□□□ -1.71
SMOQ99835 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.38□□□□□ -1.71
SMOQ99835 PDSS1P1-201ENST00000422953 1114 ntBASIC4.38□□□□□ -1.71
SMOQ99835 MTCO2P19-201ENST00000427513 598 ntBASIC4.38□□□□□ -1.71
SMOQ99835 TIMM9P3-201ENST00000428659 274 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC133104.1-201ENST00000429100 218 ntBASIC4.38□□□□□ -1.71
SMOQ99835 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.38□□□□□ -1.71
SMOQ99835 AC002486.1-201ENST00000435098 391 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.38□□□□□ -1.71
SMOQ99835 AL049734.2-201ENST00000441066 616 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC006011.1-201ENST00000442758 349 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AL671855.1-201ENST00000446875 1203 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.38□□□□□ -1.71
SMOQ99835 AC132479.1-201ENST00000449160 144 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AP1S2P1-201ENST00000457344 379 ntBASIC4.38□□□□□ -1.71
SMOQ99835 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.38□□□□□ -1.71
SMOQ99835 AC023598.1-201ENST00000472521 361 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC069439.1-201ENST00000494739 167 ntBASIC4.38□□□□□ -1.71
SMOQ99835 HMGB1P21-201ENST00000502313 581 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.38□□□□□ -1.71
SMOQ99835 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.38□□□□□ -1.71
SMOQ99835 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.38□□□□□ -1.71
SMOQ99835 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.38□□□□□ -1.71
SMOQ99835 MTCO3P44-201ENST00000510977 541 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.38□□□□□ -1.71
SMOQ99835 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.38□□□□□ -1.71
SMOQ99835 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.38□□□□□ -1.71
SMOQ99835 AC022882.1-201ENST00000532142 501 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.38□□□□□ -1.71
SMOQ99835 DYNLL1P4-201ENST00000549314 266 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC063950.1-201ENST00000552036 308 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AL845331.3-202ENST00000562856 261 ntBASIC4.38□□□□□ -1.71
SMOQ99835 MIR98-201ENST00000606724 119 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AL161734.1-201ENST00000609720 557 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC064801.1-201ENST00000612025 407 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AL133173.2-201ENST00000614270 90 ntBASIC4.38□□□□□ -1.71
SMOQ99835 ZYXP1-201ENST00000617638 118 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC012150.2-201ENST00000621300 544 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC091953.2-201ENST00000623979 160 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC079597.1-201ENST00000624306 508 ntBASIC4.38□□□□□ -1.71
SMOQ99835 AC099654.14-201ENST00000638599 341 ntBASIC4.38□□□□□ -1.71
SMOQ99835 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMOQ99835 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.38□□□□□ -1.71
SMOQ99835 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMOQ99835 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SMOQ99835 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMOQ99835 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SMOQ99835 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.37□□□□□ -1.71
SMOQ99835 AC116667.1-201ENST00000604855 2072 ntBASIC4.37□□□□□ -1.71
SMOQ99835 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SMOQ99835 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.37□□□□□ -1.71
SMOQ99835 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.37□□□□□ -1.71
SMOQ99835 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.37□□□□□ -1.71
SMOQ99835 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
SMOQ99835 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMOQ99835 FRG1BP-201ENST00000278882 761 ntBASIC4.37□□□□□ -1.71
SMOQ99835 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMOQ99835 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 RNA5SP258-201ENST00000362750 119 ntBASIC4.37□□□□□ -1.71
SMOQ99835 RNU6-181P-201ENST00000363225 107 ntBASIC4.37□□□□□ -1.71
SMOQ99835 RNA5SP479-201ENST00000364858 117 ntBASIC4.37□□□□□ -1.71
SMOQ99835 Y_RNA.402-201ENST00000383972 102 ntBASIC4.37□□□□□ -1.71
SMOQ99835 MRPL42P2-201ENST00000403169 426 ntBASIC4.37□□□□□ -1.71
SMOQ99835 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.37□□□□□ -1.71
SMOQ99835 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMOQ99835 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.37□□□□□ -1.71
SMOQ99835 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 AC019097.1-201ENST00000424783 735 ntBASIC4.37□□□□□ -1.71
SMOQ99835 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.37□□□□□ -1.71
SMOQ99835 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.37□□□□□ -1.71
SMOQ99835 snoU13.8-201ENST00000458890 104 ntBASIC4.37□□□□□ -1.71
SMOQ99835 RPL37P6-202ENST00000464216 403 ntBASIC4.37□□□□□ -1.71
SMOQ99835 RPL5P30-201ENST00000465511 891 ntBASIC4.37□□□□□ -1.71
SMOQ99835 AC007182.2-201ENST00000489251 402 ntBASIC4.37□□□□□ -1.71
SMOQ99835 RN7SL604P-201ENST00000492589 296 ntBASIC4.37□□□□□ -1.71
SMOQ99835 AC010493.1-201ENST00000513479 292 ntBASIC4.37□□□□□ -1.71
SMOQ99835 Y_RNA.704-201ENST00000516851 102 ntBASIC4.37□□□□□ -1.71
SMOQ99835 RNU6-445P-201ENST00000516949 107 ntBASIC4.37□□□□□ -1.71
SMOQ99835 IGLVIV-53-201ENST00000520107 367 ntBASIC4.37□□□□□ -1.71
SMOQ99835 AC107934.1-201ENST00000522215 217 ntBASIC4.37□□□□□ -1.71
SMOQ99835 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.37□□□□□ -1.71
SMOQ99835 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.37□□□□□ -1.71
SMOQ99835 AC090615.1-201ENST00000577519 154 ntBASIC4.37□□□□□ -1.71
SMOQ99835 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.37□□□□□ -1.71
SMOQ99835 AC007566.2-201ENST00000603642 413 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms