Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OR5BR1P-201ENST00000524992 1330 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 FGF7P2-201ENST00000332473 296 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 RNU6-501P-201ENST00000364072 100 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 RNVU1-3-201ENST00000364313 161 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PKP4Q99569 RNU6-1181P-201ENST00000384191 106 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 RNU6-1042P-201ENST00000384204 107 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 RPL23AP29-201ENST00000397284 453 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP4Q99569 AL136133.1-201ENST00000413694 376 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.8□□□□□ -1.8
PKP4Q99569 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP4Q99569 Z97055.1-201ENST00000419730 712 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 MTND4LP11-201ENST00000422184 280 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 OR8F1P-201ENST00000425243 930 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP4Q99569 MTND1P1-201ENST00000445453 368 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 EPS15P1-201ENST00000448836 336 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 RPS17P13-201ENST00000448974 407 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 DNAJC19P1-201ENST00000455312 319 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 ARPC3P2-201ENST00000457786 533 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 TPT1P7-201ENST00000458300 517 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 SNRPGP3-201ENST00000469405 227 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 VN1R17P-201ENST00000472048 1090 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 RPL9P33-201ENST00000484311 566 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 KLRA1P-201ENST00000503499 986 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 AC116347.2-201ENST00000514912 523 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP4Q99569 AC027309.2-201ENST00000520566 192 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP4Q99569 AC239860.2-201ENST00000525886 270 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.8□□□□□ -1.8
PKP4Q99569 AP003392.2-201ENST00000527269 208 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 OR4A12P-201ENST00000530847 918 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.8□□□□□ -1.8
PKP4Q99569 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.8□□□□□ -1.8
PKP4Q99569 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP4Q99569 GTF2IP22-201ENST00000554443 182 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 SULT1C2P1-202ENST00000562418 459 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP4Q99569 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP4Q99569 AC138749.5-201ENST00000611461 208 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 AC008498.1-201ENST00000613012 531 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP4Q99569 AC120349.2-201ENST00000625002 298 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 UBE3AP2-201ENST00000429033 2259 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKP4Q99569 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PKP4Q99569 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP4Q99569 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 AL079343.1-201ENST00000572358 1771 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 RNU6-600P-201ENST00000362524 99 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 Y_RNA.41-201ENST00000362646 102 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RNU6-216P-201ENST00000363282 104 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RNU6-328P-201ENST00000390887 106 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 MTND4LP20-201ENST00000402379 270 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 PPIAP31-201ENST00000405422 495 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RNU2-66P-201ENST00000410650 161 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RNU6-628P-201ENST00000410675 107 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP4Q99569 AC092634.6-201ENST00000418558 192 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AL159169.1-201ENST00000421119 127 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 MTCO3P1-205ENST00000422088 832 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 HMGB1P12-201ENST00000438594 598 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 MTND2P20-201ENST00000440805 661 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.79□□□□□ -1.8
PKP4Q99569 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 RPL18AP17-201ENST00000455326 198 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RPL21P11-201ENST00000461458 483 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RPL23AP62-201ENST00000463396 453 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RPL30P9-201ENST00000465586 330 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC096751.1-202ENST00000502691 1067 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RNU6-1178P-201ENST00000516674 107 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 SNORA48.10-201ENST00000516965 160 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 IGKV2-23-201ENST00000518729 323 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC087276.1-201ENST00000529659 480 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC109635.4-202ENST00000531666 412 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP4Q99569 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP4Q99569 AC136619.2-201ENST00000563361 631 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC087481.2-201ENST00000565492 330 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms