Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 MAPK10-266ENST00000641066 6555 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC093010.3-201ENST00000570269 15214 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 RNU1-51P-201ENST00000365345 176 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 RNU4-74P-201ENST00000411280 161 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 snoU109.4-201ENST00000458953 143 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 MIR4644-201ENST00000579929 84 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC009831.4-201ENST00000620744 325 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 MIR3199-2-201ENST00000636243 86 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC008173.1-201ENST00000418901 264 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 MED6P1-201ENST00000439659 713 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AP002748.2-201ENST00000528671 348 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC004486.1-201ENST00000546846 233 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 AC092650.2-201ENST00000619984 902 ntBASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD1Q96PZ7 TPMTP3-201ENST00000411928 735 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 TOMM22P6-201ENST00000465035 409 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AC117532.1-201ENST00000514638 323 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AC067805.1-201ENST00000559344 470 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 OR1S1-201ENST00000624470 978 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 RN7SKP49-201ENST00000516675 260 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 IGKV2D-36-201ENST00000518643 226 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AL627230.5-201ENST00000619807 58 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AL159169.1-201ENST00000421119 127 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 HMGB1P27-201ENST00000431429 603 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AL445669.2-201ENST00000454425 421 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AC011604.1-201ENST00000545978 196 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 AL451049.1-201ENST00000608672 497 ntBASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CSMD1Q96PZ7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 AC013404.1-201ENST00000413068 249 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 MTND3P6-201ENST00000485242 339 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 AC022634.1-201ENST00000520765 532 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 HIGD1AP10-201ENST00000527837 282 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 AL627309.6-201ENST00000606857 840 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 MTCO1P4-201ENST00000520516 1409 ntBASIC1.68□□□□□ -2.14
CSMD1Q96PZ7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 SNORA51.4-201ENST00000364993 124 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 VN1R31P-201ENST00000417498 730 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 USP9YP8-201ENST00000441913 500 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 RPS4XP11-201ENST00000446897 772 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 AC008526.1-201ENST00000509149 338 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 TPMTP1-201ENST00000592307 737 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 LRRC77P-213ENST00000637727 880 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 ZNF720P1-201ENST00000562403 1939 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 MTCO3P31-201ENST00000405526 789 ntBASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD1Q96PZ7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms