Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC140479.2-201ENST00000421567 3130 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC007938.2-201ENST00000604666 2634 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC012254.3-201ENST00000591183 2117 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AL138713.1-201ENST00000624026 2130 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 GNL2P1-201ENST00000451274 2190 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.16-201ENST00000362421 102 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.240-201ENST00000364469 95 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 RNA5SP479-201ENST00000364858 117 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 SNORD115-46-201ENST00000390982 71 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 SNORD70.1-201ENST00000391007 85 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.626-201ENST00000411288 95 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 NME1P1-201ENST00000420914 382 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 CYCSP12-201ENST00000437729 300 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 RAC1P7-201ENST00000445367 377 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC006967.1-201ENST00000467608 589 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AL136126.1-201ENST00000473603 402 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 RN7SL561P-201ENST00000488553 281 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 HMGN2P36-201ENST00000529541 409 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC063949.1-201ENST00000552900 865 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AL121576.1-201ENST00000556055 276 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC106782.4-201ENST00000568264 210 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC104465.1-201ENST00000611365 139 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 MRPL57P1-201ENST00000621486 265 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC093278.2-201ENST00000564956 2485 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 AC005332.9-201ENST00000620266 2921 ntBASIC5.68□□□□□ -1.5
CNTNAP3BQ96NU0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AP000432.2-201ENST00000624164 2048 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RNA5SP183-201ENST00000362452 119 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-1020P-201ENST00000363684 107 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RNU1-130P-201ENST00000363930 160 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 SNORA70.2-201ENST00000364506 135 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.273-201ENST00000364703 102 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AL136372.1-201ENST00000403060 228 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-174P-201ENST00000410406 106 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-387P-201ENST00000411331 105 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RPL21P109-201ENST00000422213 475 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RNU7-59P-201ENST00000459101 61 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 COX6CP14-201ENST00000469580 174 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-911P-201ENST00000516523 104 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 MRPS18CP4-201ENST00000535821 231 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AC093227.2-201ENST00000589357 285 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AC005191.1-201ENST00000603950 358 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AC141002.1-201ENST00000607025 279 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AC009570.1-201ENST00000609599 745 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AC126915.2-201ENST00000610957 190 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 AC074141.1-201ENST00000588129 2995 ntBASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms