Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 AC008015.1-201ENST00000555505 465 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 AC245100.2-201ENST00000454544 1679 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 MTCO1P4-201ENST00000520516 1409 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CFAP54Q96N23 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 TMEM248P1-201ENST00000510579 951 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 AC025281.1-201ENST00000567026 265 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 OR4G1P-201ENST00000588632 938 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CFAP54Q96N23 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 TPMTP3-201ENST00000411928 735 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 CACYBPP1-201ENST00000438592 684 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 HMGB1P41-201ENST00000520234 440 ntBASIC1.96□□□□□ -2.1
CFAP54Q96N23 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.96□□□□□ -2.1
CFAP54Q96N23 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CFAP54Q96N23 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CFAP54Q96N23 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CFAP54Q96N23 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
CFAP54Q96N23 U8.8-201ENST00000365399 135 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 AL358453.1-201ENST00000422522 250 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 RPS24P8-201ENST00000431490 402 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 KATNBL1P3-201ENST00000443475 909 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.95□□□□□ -2.1
CFAP54Q96N23 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.95□□□□□ -2.1
CFAP54Q96N23 RPS27P27-201ENST00000498779 255 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 RNU6-250P-201ENST00000516958 103 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 AP002748.2-201ENST00000528671 348 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CFAP54Q96N23 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.95□□□□□ -2.1
CFAP54Q96N23 YWHAZP7-201ENST00000436906 631 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.95□□□□□ -2.1
CFAP54Q96N23 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CFAP54Q96N23 AC022634.1-201ENST00000520765 532 ntBASIC1.95□□□□□ -2.1
CFAP54Q96N23 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.95□□□□□ -2.1
CFAP54Q96N23 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CFAP54Q96N23 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CFAP54Q96N23 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CFAP54Q96N23 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 Y_RNA.68-201ENST00000362881 102 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AL035405.1-201ENST00000400795 710 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 RNU2-6P-201ENST00000411404 190 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 PIGFP3-201ENST00000441918 722 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AC087441.2-201ENST00000529141 262 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AP006248.2-201ENST00000623309 592 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CFAP54Q96N23 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 AL627390.1-201ENST00000396055 340 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 AL845331.3-202ENST00000562856 261 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 MYL12BP1-201ENST00000569826 507 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 AC006378.2-201ENST00000623178 2476 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 MIR548J-201ENST00000408833 112 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AC013404.1-201ENST00000413068 249 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.94□□□□□ -2.1
CFAP54Q96N23 MTAPP1-201ENST00000489154 819 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 XKRY-201ENST00000510392 1100 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 USP9YP5-201ENST00000511770 630 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AC073387.2-201ENST00000604797 784 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AL008729.2-201ENST00000606393 473 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 AC069234.5-201ENST00000611056 416 ntBASIC1.94□□□□□ -2.1
CFAP54Q96N23 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CFAP54Q96N23 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CFAP54Q96N23 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 SNORA51.4-201ENST00000364993 124 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 RNU6-1027P-201ENST00000383998 107 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 AC009969.1-201ENST00000438726 172 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 MTCYBP31-201ENST00000438855 1122 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 MAPK10-266ENST00000641066 6555 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 AC073136.2-201ENST00000417282 849 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 AC234781.4-201ENST00000419384 244 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 AC108734.3-201ENST00000481241 1165 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms