Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC010301.1-201ENST00000473936 355 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 MTND6P6-201ENST00000478031 263 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 TMEM251P1-201ENST00000503717 318 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC026412.2-201ENST00000512270 1075 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC013828.2-201ENST00000532487 235 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 MIR3913-1-201ENST00000577744 102 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 MIR544B-201ENST00000582372 78 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 U3.45-201ENST00000607547 219 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AL359535.1-201ENST00000612100 1087 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC244100.1-202ENST00000621554 382 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 AC093591.3-201ENST00000634516 308 ntBASIC4.34□□□□□ -1.71
CCDC17Q96LX7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC17Q96LX7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC17Q96LX7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CCDC17Q96LX7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 BDP1P-201ENST00000582658 1990 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AP002907.1-201ENST00000606361 1430 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC007685.1-201ENST00000329806 452 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 SNORD74.4-201ENST00000364129 80 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 ARF4P3-201ENST00000397387 509 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 HMGN1P14-201ENST00000412459 517 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC093578.1-201ENST00000415219 368 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 EIF1P1-201ENST00000421436 341 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 MRPS10P2-201ENST00000431226 381 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 RPS20P1-201ENST00000434853 354 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC091862.1-201ENST00000438016 1100 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC092013.1-201ENST00000438795 332 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 MTATP6P23-201ENST00000440153 476 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 RNU7-136P-201ENST00000458819 69 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 LARP1BP2-201ENST00000486594 519 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 RN7SKP298-201ENST00000515950 94 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC104986.1-201ENST00000517978 436 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AP004247.1-201ENST00000531556 1289 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AP002453.2-201ENST00000533503 320 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AL133241.1-201ENST00000556832 487 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 TPRKBP2-201ENST00000565969 475 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 MIR4637-201ENST00000582405 84 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 BNIP3P23-201ENST00000599655 511 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 BNIP3P11-201ENST00000603878 563 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC010591.1-201ENST00000603941 649 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 PRELID3BP8-201ENST00000604148 295 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC009237.17-201ENST00000618111 748 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC233309.1-201ENST00000619522 751 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC015967.1-201ENST00000619893 476 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AC119674.1-207ENST00000641355 633 ntBASIC4.33□□□□□ -1.72
CCDC17Q96LX7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC17Q96LX7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC011155.1-201ENST00000316512 456 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 SNORA63.1-201ENST00000362493 131 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 RNA5SP502-201ENST00000362694 119 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 RNU6-289P-201ENST00000364093 107 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 RN7SKP226-201ENST00000364912 300 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 U8.14-201ENST00000390843 143 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 Y_RNA.582-201ENST00000391023 95 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 RNU6-952P-201ENST00000391164 108 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 DHFRP6-201ENST00000401776 268 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 RPL23AP48-201ENST00000406913 488 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms