Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AP000889.2-201ENST00000532684 490 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 OR8K4P-201ENST00000534608 872 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC104229.1-201ENST00000561364 255 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC023824.2-201ENST00000566185 400 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 ATP5F1P7-201ENST00000567330 760 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC106734.1-201ENST00000568646 663 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 ZNF92P2-201ENST00000600543 1059 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC010591.1-201ENST00000603941 649 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AP004247.3-201ENST00000608682 624 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 MIR6748-201ENST00000610433 71 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC068722.2-201ENST00000618734 544 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AL109659.3-201ENST00000624985 950 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AL590396.2-201ENST00000636511 1041 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AL035425.3-201ENST00000564206 4996 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 MFSD8-213ENST00000641134 1327 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 RNA5SP210-201ENST00000391034 120 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AL355497.1-201ENST00000406262 551 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 SNORA11B-201ENST00000408175 129 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 SNORA11C-201ENST00000408532 129 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 MORF4L1P6-201ENST00000418771 268 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AL035423.1-201ENST00000420331 213 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC007560.1-201ENST00000426912 237 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 C4BPAP2-201ENST00000428434 478 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 RPS15AP27-201ENST00000449183 343 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 DNAJC19P8-201ENST00000452887 259 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 RN7SL132P-201ENST00000478131 296 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 RNU6-1102P-201ENST00000516149 96 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 SNORA70.16-201ENST00000516390 95 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 SNRPGP1-201ENST00000553864 222 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AC055876.5-201ENST00000605667 259 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AL118556.2-201ENST00000614375 824 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 AL163152.1-201ENST00000642001 374 ntBASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX2Q96KN3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AC008568.2-201ENST00000623862 2313 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 RNU6-650P-201ENST00000365658 111 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 RNU6-730P-201ENST00000383954 104 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 MIR141-201ENST00000384975 95 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 RNU6-272P-201ENST00000411028 104 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AC098614.2-201ENST00000426040 255 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 H2AFZP6-201ENST00000444403 394 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 RNU7-26P-201ENST00000458980 63 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AC078857.1-201ENST00000469870 667 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AC015724.1-201ENST00000478577 156 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 HMGN1P11-201ENST00000508668 303 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AC104108.1-201ENST00000509930 412 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 OR8R1P-201ENST00000543943 764 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 GTF2IP22-201ENST00000554443 182 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 RPS3AP23-202ENST00000574601 686 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AC090912.3-201ENST00000609775 533 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 RMST_10.1-201ENST00000616309 154 ntBASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX2Q96KN3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC008432.1-201ENST00000615912 1320 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 RNU6-792P-201ENST00000363490 107 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 SNORD56.4-201ENST00000363883 71 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 RPL21P17-201ENST00000397467 475 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC009414.1-201ENST00000427200 443 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC079780.1-201ENST00000428259 207 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms