Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC104662.1-201ENST00000604448 511 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AL359999.1-201ENST00000604513 294 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC004853.1-201ENST00000604902 698 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AL049634.3-201ENST00000604968 457 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC015813.4-201ENST00000610469 179 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MIR6758-201ENST00000620653 63 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 Y_RNA.46-201ENST00000362695 102 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 MIR141-201ENST00000384975 95 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 RN7SKP33-201ENST00000410942 340 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AL359704.1-201ENST00000411586 781 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 ELOCP18-201ENST00000434209 337 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 Z74696.2-201ENST00000436514 498 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 RPL7P28-201ENST00000437739 740 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 Z95327.1-201ENST00000446082 482 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 FABP3P2-201ENST00000453169 399 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC010618.1-201ENST00000469924 477 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC026979.1-201ENST00000492525 396 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC078918.1-201ENST00000498515 228 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 EXOC5P1-201ENST00000510543 1969 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 SNORA18.6-201ENST00000516792 115 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 IGKV2-38-201ENST00000517443 247 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AL157394.1-201ENST00000562983 1224 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC108747.1-201ENST00000609508 535 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 MIR6716-201ENST00000613413 80 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 MIR6830-201ENST00000636015 70 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 AC099654.13-201ENST00000639774 207 ntBASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP3Q96JB5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDK5RAP3Q96JB5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 SNORA37-201ENST00000384504 129 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 SNORD115.1-201ENST00000391109 76 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 FCF1P10-201ENST00000407590 479 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 HSPE1P12-201ENST00000412576 301 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 ELOCP17-201ENST00000414751 326 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 SPA17P1-201ENST00000416656 452 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 C4BPAP2-201ENST00000428434 478 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 PGBD4P3-201ENST00000440731 581 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 H2AFZP6-201ENST00000444403 394 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AL353691.1-201ENST00000451332 387 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 snoU13.3-201ENST00000459441 104 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 RPL37P25-201ENST00000507308 276 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC006390.1-201ENST00000508068 283 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC069240.1-201ENST00000548774 375 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 MIR3913-1-201ENST00000577744 102 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms