Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC002550.2-201ENST00000621246 394 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 AL445264.1-201ENST00000621719 171 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 MTND5P24-201ENST00000438892 1767 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VMP1Q96GC9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC087359.1-201ENST00000508335 1740 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 TPTE2P4-201ENST00000258589 1605 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VMP1Q96GC9 AL136310.1-201ENST00000404926 654 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 VN1R51P-201ENST00000411675 945 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AL356867.1-201ENST00000429623 299 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AL445584.1-201ENST00000431451 330 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC090774.1-201ENST00000435925 246 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 SNRPGP6-201ENST00000451124 220 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 RPL7P15-201ENST00000461190 712 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 RN7SL542P-201ENST00000467147 294 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 SETP11-201ENST00000473027 690 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 SAP18P1-201ENST00000512058 390 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC021451.1-201ENST00000523498 1129 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC008011.1-201ENST00000545989 227 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC125611.2-201ENST00000551907 647 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC090877.1-201ENST00000561418 344 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 AC034268.2-201ENST00000571784 482 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 OR4K7P-201ENST00000580232 945 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 BBIP1P1-201ENST00000602999 279 ntBASIC3.53□□□□□ -1.84
VMP1Q96GC9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VMP1Q96GC9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VMP1Q96GC9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VMP1Q96GC9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC091564.4-201ENST00000533934 2194 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 MTND4P9-201ENST00000507819 1346 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VMP1Q96GC9 Y_RNA.234-201ENST00000364409 97 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 MTATP6P20-201ENST00000414147 562 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 USP9YP11-201ENST00000427537 717 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 MRPS31P2-201ENST00000451581 518 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC006539.3-201ENST00000454258 129 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 MTATP6P14-201ENST00000455189 673 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 BX322784.1-201ENST00000455793 1077 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 snoU109.3-201ENST00000459477 145 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AL133162.1-201ENST00000463228 453 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC084198.1-201ENST00000477747 402 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 HSPE1P6-201ENST00000479457 291 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 RPL30P5-201ENST00000494923 336 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 GMPSP1-201ENST00000514075 579 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC026801.2-201ENST00000515352 425 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 RNU6-798P-201ENST00000516912 103 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 SUMO2P20-201ENST00000520803 283 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VMP1Q96GC9 AP000867.2-201ENST00000532468 320 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 MIR5187-201ENST00000583479 76 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 DUXAP4-201ENST00000603046 613 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 NUTF2P8-201ENST00000604593 363 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AL137849.1-201ENST00000604767 169 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AL158211.4-201ENST00000606988 584 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AL121652.1-201ENST00000608851 448 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC006213.4-201ENST00000616184 634 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 AC008443.7-201ENST00000622195 246 ntBASIC3.52□□□□□ -1.85
VMP1Q96GC9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VMP1Q96GC9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VMP1Q96GC9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.52□□□□□ -1.85
VMP1Q96GC9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VMP1Q96GC9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VMP1Q96GC9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VMP1Q96GC9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VMP1Q96GC9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
VMP1Q96GC9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VMP1Q96GC9 RNU6-283P-201ENST00000364788 107 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms