Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC053481.3-201ENST00000577881 843 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 AC004223.2-201ENST00000590309 544 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 AC022916.3-201ENST00000592961 742 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 AC112187.2-201ENST00000604345 283 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 RMST_8.1-201ENST00000610287 165 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 AC073114.1-201ENST00000612027 490 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 AL158063.1-201ENST00000615349 536 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 MIR6500-201ENST00000622700 86 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 AL356266.1-201ENST00000623311 483 ntBASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A1Q8WWI5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 RNU6-501P-201ENST00000364072 100 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 RNU1-64P-201ENST00000365443 163 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AL136116.1-201ENST00000403591 381 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AL355379.1-201ENST00000405542 640 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC005517.2-201ENST00000424673 553 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 ARF4P2-201ENST00000430209 526 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 EZH2P1-201ENST00000431167 291 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 LARP1BP3-201ENST00000437229 869 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 CDC27P1-201ENST00000445384 715 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 RPL36AP33-201ENST00000450395 310 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 MTCO2P18-201ENST00000457151 658 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC087312.1-201ENST00000471411 480 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC106872.3-201ENST00000495104 446 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 FCF1P3-201ENST00000496394 590 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC021678.1-201ENST00000505195 936 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 ARL2BPP6-201ENST00000512757 439 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 SCARNA14-201ENST00000516903 136 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 RNU4-60P-201ENST00000517239 135 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 IGKV2D-36-201ENST00000518643 226 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC008011.1-201ENST00000545989 227 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 MIR1254-2-201ENST00000579553 63 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC040904.1-201ENST00000590850 223 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC107214.2-201ENST00000608204 634 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC012360.2-201ENST00000609349 391 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC011939.3-201ENST00000613686 466 ntBASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A1Q8WWI5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RNU6-777P-201ENST00000364265 104 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RNVU1-3-201ENST00000364313 161 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RNU6-343P-201ENST00000364709 104 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RNU6-213P-201ENST00000384051 104 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 MIR184-201ENST00000384962 84 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 U3.29-201ENST00000391296 212 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 MIR1305-201ENST00000408300 86 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 HMGB1P11-201ENST00000413899 637 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AL831737.1-201ENST00000441288 271 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RPL21P89-201ENST00000444021 467 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 PAXBP1P1-201ENST00000449315 447 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC005297.2-201ENST00000450430 606 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 MRPS31P2-201ENST00000451581 518 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 BX322784.1-201ENST00000455793 1077 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 UBDP1-202ENST00000457888 382 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC004801.2-202ENST00000463559 283 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC104563.1-201ENST00000476147 376 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC116337.2-201ENST00000477662 156 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 RAP1BP2-201ENST00000478270 544 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC082651.2-201ENST00000496833 166 ntBASIC3.69□□□□□ -1.82
SLC44A1Q8WWI5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms