Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL121603.1-201ENST00000553815 142 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 IGHV3-29-201ENST00000604817 344 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC008759.3-201ENST00000613300 508 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AP003122.6-201ENST00000623831 495 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC090897.3-201ENST00000636973 1157 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC130650.2-201ENST00000618736 2403 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC092447.7-201ENST00000422212 1621 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC096644.4-201ENST00000563417 2912 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC108206.1-201ENST00000570186 4159 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.21□□□□□ -1.89
CCDC65Q8IXS2 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.21□□□□□ -1.89
CCDC65Q8IXS2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 RNU6-582P-201ENST00000362989 107 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 RNU6-251P-201ENST00000363235 104 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 MIR217-201ENST00000384817 110 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 MTATP6P19-201ENST00000413797 659 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AL451074.5-201ENST00000415894 435 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC005345.1-201ENST00000431868 217 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC083906.5-201ENST00000503722 328 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC111000.2-201ENST00000507775 550 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 RNU6-885P-201ENST00000516607 104 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 RNA5SP135-201ENST00000517019 125 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC083760.1-201ENST00000589621 670 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AL669831.4-202ENST00000590817 238 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC091057.2-201ENST00000602594 792 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 RPL23AP88-201ENST00000605759 454 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AP005137.2-201ENST00000609238 400 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AL359198.2-201ENST00000611836 194 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AL020991.1-201ENST00000612314 373 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC090116.1-201ENST00000615679 446 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC068722.2-201ENST00000618734 544 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC010338.1-201ENST00000621823 717 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 AC091953.5-201ENST00000622919 233 ntBASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC65Q8IXS2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 RNU5B-4P-201ENST00000363508 111 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 SNORA14A-201ENST00000364773 135 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 Y_RNA.493-201ENST00000384422 102 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 MIR512-1-201ENST00000384913 84 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AL355615.1-201ENST00000406187 641 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 MIR1250-201ENST00000408098 113 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 MIR1289-1-201ENST00000408836 144 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 RPL19P1-201ENST00000411635 428 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AC006548.1-201ENST00000427470 102 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AC092634.2-201ENST00000428146 1010 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 COX6CP18-201ENST00000448769 222 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 RPL37P4-201ENST00000448908 268 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AC125611.2-201ENST00000551907 647 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 MIR4325-201ENST00000583049 90 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AC025588.3-201ENST00000604182 274 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 BNIP3P19-201ENST00000605397 577 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AC090115.4-201ENST00000609970 188 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 ATP5A1P2-202ENST00000616464 443 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 CR381572.1-201ENST00000625098 102 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 AC006927.2-201ENST00000639256 389 ntBASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC65Q8IXS2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 RNU6-839P-201ENST00000363347 108 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 RNU6-115P-201ENST00000364310 107 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 RNU1-140P-201ENST00000365040 165 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AL121978.1-201ENST00000402778 359 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 RAP1BP1-201ENST00000412709 553 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 RPL35AP12-201ENST00000425362 338 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 DUTP6-201ENST00000425573 462 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC013262.1-201ENST00000426710 252 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 Z93242.1-201ENST00000427102 353 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 HMGN1P5-201ENST00000448591 263 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AL034418.1-201ENST00000448675 860 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 RPL21P131-201ENST00000497298 483 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC026414.1-201ENST00000504046 698 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms