Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 PWAR1-201ENST00000624188 2414 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 RNU1-76P-201ENST00000362903 159 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 U3.2-201ENST00000362981 210 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 RNY4P28-201ENST00000365281 93 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 MIR585-201ENST00000384887 94 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC016769.3-201ENST00000396562 315 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 RN7SKP125-201ENST00000410481 302 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC017079.2-201ENST00000416102 485 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC084198.1-201ENST00000477747 402 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 RPL7AP6-201ENST00000477943 801 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC097462.2-201ENST00000504623 481 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 RBBP4P6-201ENST00000508098 202 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC092436.3-201ENST00000511788 257 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 Y_RNA.687-201ENST00000516558 91 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 IGLV3-24-201ENST00000517477 197 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 MIR4311-201ENST00000580794 100 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 PSMA6P4-201ENST00000603247 718 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 MIR6798-201ENST00000612887 67 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AC011460.1-201ENST00000636268 1834 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 BDP1P-201ENST00000582658 1990 ntBASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS3Q8IXF0 AL591135.1-201ENST00000401578 5914 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 DNM1P47-203ENST00000571780 12667 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 NXPH1-205ENST00000602349 1953 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 RPL23P2-201ENST00000320371 421 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 RNU6-511P-201ENST00000363496 107 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 MIR765-201ENST00000390226 114 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 U3.20-201ENST00000390909 217 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 RNA5SP339-201ENST00000390987 122 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 Y_RNA.602-201ENST00000410535 92 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC018437.1-201ENST00000492214 406 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 RN7SL447P-201ENST00000494711 245 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 RPS23P5-201ENST00000495419 428 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 RNA5SP272-201ENST00000516095 111 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 EIF4A2P5-201ENST00000529914 499 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC009643.1-201ENST00000532030 391 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC027288.2-201ENST00000553028 243 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC136932.1-201ENST00000574771 208 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 RN7SL708P-201ENST00000580952 299 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 MIR4300-201ENST00000581016 96 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC126915.2-201ENST00000610957 190 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AC005224.3-201ENST00000584683 2140 ntBASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS3Q8IXF0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.8□□□□□ -1.48
NPAS3Q8IXF0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS3Q8IXF0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS3Q8IXF0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS3Q8IXF0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS3Q8IXF0 SNORD1C-201ENST00000363315 78 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms