Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RPL31P52-201ENST00000407532 367 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC011933.1-201ENST00000413334 321 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP43Q70EL4 AC127526.1-201ENST00000417526 366 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.72□□□□□ -1.81
USP43Q70EL4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP43Q70EL4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.72□□□□□ -1.81
USP43Q70EL4 AL512286.1-201ENST00000439244 400 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 GDI2P2-201ENST00000445131 608 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 Z99127.3-201ENST00000448158 395 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AL500522.2-201ENST00000448562 343 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC098824.1-201ENST00000453565 980 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 BX248409.1-201ENST00000455497 255 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC013267.1-201ENST00000458227 267 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC116533.1-201ENST00000459748 321 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.72□□□□□ -1.81
USP43Q70EL4 RPL21P129-201ENST00000491732 478 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.72□□□□□ -1.81
USP43Q70EL4 PTGES3P3-201ENST00000511479 482 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 RNU6-314P-201ENST00000516574 104 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP43Q70EL4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.72□□□□□ -1.81
USP43Q70EL4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.72□□□□□ -1.81
USP43Q70EL4 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.72□□□□□ -1.81
USP43Q70EL4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.72□□□□□ -1.81
USP43Q70EL4 GTF2IP22-201ENST00000554443 182 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 MIR3138-201ENST00000585238 82 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 IPO5P1-202ENST00000600039 287 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.72□□□□□ -1.81
USP43Q70EL4 AC012065.4-201ENST00000602445 679 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 AL049634.3-201ENST00000604968 457 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC114781.5-201ENST00000615297 108 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP43Q70EL4 AC010338.1-201ENST00000621823 717 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 Z99496.1-201ENST00000469424 1477 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
USP43Q70EL4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.81
USP43Q70EL4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP43Q70EL4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.71□□□□□ -1.82
USP43Q70EL4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP43Q70EL4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP43Q70EL4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP43Q70EL4 RNU5D-1-201ENST00000363299 116 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 RNA5SP175-201ENST00000364275 119 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 RNU6-1227P-201ENST00000383981 107 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 Y_RNA.582-201ENST00000391023 95 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC068533.2-201ENST00000411872 306 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AL354751.2-201ENST00000415471 210 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 BTF3L4P3-201ENST00000418879 476 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC008850.1-201ENST00000427546 362 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 RPL31P54-201ENST00000429803 370 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 USP9YP7-201ENST00000436723 430 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 DPPA3P1-201ENST00000448050 469 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 USP9YP32-201ENST00000452432 430 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 DNAJC19P1-201ENST00000455312 319 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 BX322784.1-201ENST00000455793 1077 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 HMGN1P12-201ENST00000499125 195 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC114967.1-201ENST00000504890 259 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.71□□□□□ -1.82
USP43Q70EL4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.71□□□□□ -1.82
USP43Q70EL4 PSMB7P1-201ENST00000556349 514 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 GTF2IP8-201ENST00000560687 584 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AL133457.1-201ENST00000564251 987 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 BNIP3P22-201ENST00000593399 556 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC020914.6-201ENST00000594327 272 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC005261.5-201ENST00000596280 355 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC079587.1-201ENST00000603846 277 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.71□□□□□ -1.82
USP43Q70EL4 ZYXP1-201ENST00000617638 118 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AL445567.2-201ENST00000618935 498 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms