Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13CQ709C8 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS13CQ709C8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.57□□□□□ -2.16
VPS13CQ709C8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS13CQ709C8 AC117532.1-201ENST00000514638 323 ntBASIC1.57□□□□□ -2.16
VPS13CQ709C8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.57□□□□□ -2.16
VPS13CQ709C8 MIR3199-2-201ENST00000636243 86 ntBASIC1.57□□□□□ -2.16
VPS13CQ709C8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13CQ709C8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13CQ709C8 AL592437.2-201ENST00000421655 2434 ntBASIC1.57□□□□□ -2.16
VPS13CQ709C8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 RPS3AP9-201ENST00000417027 792 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 TTC39CP1-201ENST00000512513 755 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 MIR4644-201ENST00000579929 84 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 TPMTP1-201ENST00000592307 737 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 AIMP1P1-201ENST00000418670 937 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC008526.1-201ENST00000509149 338 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 RPAP2P1-201ENST00000603626 1168 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC120053.1-201ENST00000607706 736 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC009487.2-201ENST00000420969 6821 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC005336.3-201ENST00000623833 2679 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 RNU4-74P-201ENST00000411280 161 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AL358075.3-201ENST00000426289 226 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 RPL21P18-201ENST00000469899 480 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 ASNSP4-201ENST00000511103 447 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 LRRC37A5P-203ENST00000580181 585 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AC131238.1-201ENST00000617135 328 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 MIR6132-201ENST00000622083 109 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13CQ709C8 PNPT1P2-201ENST00000456768 2050 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13CQ709C8 MTND5P35-201ENST00000557537 1720 ntBASIC1.56□□□□□ -2.16
VPS13CQ709C8 SNORD88.1-201ENST00000408684 91 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 AC093151.1-201ENST00000427711 313 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 AC129850.1-201ENST00000436203 508 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 MED6P1-201ENST00000439659 713 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 RN7SKP49-201ENST00000516675 260 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 IGKV2D-36-201ENST00000518643 226 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 AC025281.1-201ENST00000567026 265 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.55□□□□□ -2.16
VPS13CQ709C8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS13CQ709C8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS13CQ709C8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS13CQ709C8 GSTA12P-201ENST00000402398 508 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 AL159169.1-201ENST00000421119 127 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS13CQ709C8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS13CQ709C8 BX248123.2-201ENST00000606318 124 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS13CQ709C8 LRRC77P-213ENST00000637727 880 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS13CQ709C8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS13CQ709C8 NF1P5-201ENST00000588287 448 ntBASIC1.55□□□□□ -2.16
VPS13CQ709C8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 ZNF720P1-201ENST00000562403 1939 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 AC234781.4-201ENST00000419384 244 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 YWHAZP7-201ENST00000436906 631 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 ARPC3P1-201ENST00000437218 533 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 MTCO3P13-201ENST00000577757 781 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 AL512598.1-201ENST00000610158 273 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 XPOTP1-201ENST00000443317 2398 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 AC108734.3-201ENST00000481241 1165 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 AC008015.1-201ENST00000555505 465 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13CQ709C8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 DHFRP5-201ENST00000406944 564 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 HMGB1P27-201ENST00000431429 603 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms