Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 MIR513B-201ENST00000385136 84 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 TPMTP3-201ENST00000411928 735 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 HMGB3P5-201ENST00000428894 612 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 MTCYBP45-201ENST00000435243 565 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 THAP5P1-201ENST00000439089 262 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC108734.1-201ENST00000439549 399 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC010655.1-201ENST00000449336 292 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 DNAJC19P1-201ENST00000455312 319 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 U8.18-201ENST00000459285 133 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC012181.1-201ENST00000479895 423 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AP001025.2-201ENST00000490908 477 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC026784.1-201ENST00000507986 352 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC022690.1-201ENST00000526681 550 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 OR4K8P-201ENST00000578842 1048 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 TUSC7.1-201ENST00000610969 165 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 MIR6076-201ENST00000617521 113 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AC009268.2-201ENST00000621925 457 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 ZNF876P-202ENST00000398732 1485 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC008568.2-201ENST00000623862 2313 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL391417.1-201ENST00000404100 426 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 MTCO2P21-201ENST00000419780 677 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL035407.1-201ENST00000429211 571 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 SNORD121B-201ENST00000458838 81 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC021382.1-201ENST00000483523 359 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC034222.1-201ENST00000494052 532 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL139099.1-201ENST00000497398 403 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC008489.1-201ENST00000524271 483 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 DUXAP1-201ENST00000556632 463 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC106785.1-201ENST00000565935 262 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 RPL23AP84-201ENST00000571193 464 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 VN1R92P-201ENST00000598511 928 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC244505.7-201ENST00000599675 272 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL109653.1-201ENST00000603091 248 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC106900.2-201ENST00000604994 317 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC008962.1-201ENST00000605729 304 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL158211.4-201ENST00000606988 584 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL592295.2-201ENST00000612578 206 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 RNVU1-4-201ENST00000612985 164 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AL136981.2-201ENST00000617319 734 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 AC097520.1-201ENST00000624435 385 ntBASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NHLRC1Q6VVB1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 AC009812.4-201ENST00000569134 1805 ntBASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 FAM35BP-202ENST00000497389 3337 ntBASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms