Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 Z82243.1-201ENST00000609432 473 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC140479.6-201ENST00000633535 357 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC011978.2-201ENST00000569835 2054 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 RNA5SP119-201ENST00000362715 117 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 Y_RNA.188-201ENST00000363952 111 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 RNU6-593P-201ENST00000364716 112 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 MRPL42P3-201ENST00000401492 326 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AC236972.1-201ENST00000433225 199 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 IGHV5-78-201ENST00000450948 295 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 CECR9-201ENST00000453421 199 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AC006511.1-201ENST00000470614 315 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 CCDC34P1-201ENST00000507441 517 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 RNU6-764P-201ENST00000516396 105 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AP003730.1-201ENST00000524605 285 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AC109635.4-202ENST00000531666 412 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AF038458.1-201ENST00000588406 262 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AL008729.2-201ENST00000606393 473 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AC244517.1-201ENST00000606030 2086 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AC116096.1-201ENST00000566804 2314 ntBASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
COL13A1Q5TAT6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AP002512.4-202ENST00000641599 4530 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AL049641.1-201ENST00000441055 1948 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 RNU6-505P-201ENST00000384427 107 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 EIF4E2P1-201ENST00000393781 255 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC018865.2-201ENST00000423631 129 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 MTND1P17-201ENST00000448961 204 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AL162591.2-201ENST00000449634 317 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 SNORD121B-201ENST00000458838 81 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 SNORA25.10-201ENST00000515926 124 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AL049779.3-201ENST00000557141 606 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 RN7SL356P-201ENST00000582228 248 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC023043.2-201ENST00000589678 1026 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 PSMA6P4-201ENST00000603247 718 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC011155.2-201ENST00000623202 216 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC008013.2-202ENST00000637965 364 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 ZFRP1-201ENST00000457579 2970 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AL034549.2-201ENST00000618285 3373 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms