Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 RPL23AP52-201ENST00000439311 478 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 RPL23AP33-201ENST00000442301 452 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 MTATP6P30-201ENST00000443540 664 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AC132479.1-201ENST00000449160 144 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 MTCO3P20-201ENST00000454926 688 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 C1DP4-201ENST00000455429 424 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AC010469.1-201ENST00000463864 576 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 MTCO2P29-201ENST00000465212 189 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 ST13P14-201ENST00000474095 734 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 MTAPP1-201ENST00000489154 819 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AP001893.2-201ENST00000526949 202 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AP000907.2-201ENST00000530827 353 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AL845331.3-202ENST00000562856 261 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 SNORA59B-202ENST00000578183 701 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AC060771.1-201ENST00000582031 164 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AL669831.4-202ENST00000590817 238 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AL139286.1-201ENST00000604465 483 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AC011816.2-201ENST00000607089 556 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AL161734.1-201ENST00000609720 557 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AL158196.1-201ENST00000616786 434 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AC091953.2-201ENST00000623979 160 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 AL157786.1-207ENST00000627771 695 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 ELF2P3-201ENST00000445099 1506 ntBASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD3Q3KNS1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RNA5SP52-201ENST00000362448 134 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RN7SKP227-201ENST00000364445 330 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RNU6-1283P-201ENST00000365314 105 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 MIR153-1-201ENST00000384914 90 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RNU6-195P-201ENST00000411352 109 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RPS23P10-201ENST00000416185 486 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 MTND4LP11-201ENST00000422184 280 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RBMY1KP-201ENST00000423480 476 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 EIF1P3-201ENST00000423841 334 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 DPPA2P1-201ENST00000428060 556 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC133104.1-201ENST00000429100 218 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL358934.1-201ENST00000432346 324 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC000111.3-201ENST00000433478 193 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 MTND4LP10-201ENST00000435146 291 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 UBDP1-202ENST00000457888 382 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RPS7P7-201ENST00000463499 571 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 HMGB1P25-201ENST00000468402 607 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 MTCO3P38-201ENST00000468910 766 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC105137.1-201ENST00000484355 562 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 PPBPP1-201ENST00000510807 373 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 FAM92A1P1-201ENST00000528023 890 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC105233.3-201ENST00000531125 744 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL109766.1-201ENST00000555080 552 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL133241.1-201ENST00000556832 487 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 MTND6P33-201ENST00000571794 183 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC011451.2-201ENST00000604303 598 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL451044.1-201ENST00000604867 238 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL590099.1-201ENST00000615276 138 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL445567.2-201ENST00000618935 498 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL356321.1-201ENST00000621360 228 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC040168.1-201ENST00000623594 991 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC068724.3-201ENST00000625906 87 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC140479.6-201ENST00000633535 357 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AC105074.1-201ENST00000623380 3095 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 AL133243.3-201ENST00000617415 3004 ntBASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD3Q3KNS1 MAPK10-253ENST00000641010 4072 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 RNU4-1-201ENST00000363925 141 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 Y_RNA.372-201ENST00000365599 102 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 CCNG1P1-201ENST00000406783 885 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 RNU4-55P-201ENST00000410731 137 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms