Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC007336.1-201ENST00000576365 3828 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AL451007.1-201ENST00000595491 289 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 BNIP3P33-201ENST00000598912 569 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 HSPE1P7-201ENST00000604681 321 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC128687.1-201ENST00000605304 619 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 VN1R7P-201ENST00000619242 903 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 TAB3P1-202ENST00000452645 1634 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC012321.1-201ENST00000561622 1588 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 RNU5D-1-201ENST00000363299 116 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 RNU1-52P-201ENST00000384190 164 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 Y_RNA.493-201ENST00000384422 102 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AL513331.1-201ENST00000411908 397 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 TMEM167AP1-201ENST00000423409 219 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 MORF4L1P7-201ENST00000426038 703 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AL121871.1-201ENST00000443413 436 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 RPS3AP12-201ENST00000443616 753 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 CACYBPP2-201ENST00000453625 678 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AC133134.1-201ENST00000466800 359 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AC104687.1-201ENST00000485829 412 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 SNORD116-30-201ENST00000516468 85 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AC087272.1-201ENST00000523624 533 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AP003102.1-201ENST00000525638 661 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AP000867.2-201ENST00000532468 320 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AMZ2P1-203ENST00000565833 850 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 RPS15AP11-201ENST00000594193 385 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 NRBF2P5-201ENST00000603087 788 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 NTAN1P1-201ENST00000603150 646 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 XIAPP1-201ENST00000603162 600 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AL356280.1-201ENST00000603614 379 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AL035413.2-201ENST00000604801 525 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 AC007619.2-201ENST00000605743 379 ntBASIC1.96□□□□□ -2.1
HIST1H1AQ02539 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.96□□□□□ -2.1
HIST1H1AQ02539 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC087359.1-201ENST00000508335 1740 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 SNORD62.1-201ENST00000362541 86 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 RNA5SP258-201ENST00000362750 119 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 RNU6-1072P-201ENST00000384703 107 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 RNU6-443P-201ENST00000384780 107 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 MIR128-1-201ENST00000384921 82 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 RNU4-78P-201ENST00000410940 126 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC073264.1-201ENST00000411508 416 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC006548.1-201ENST00000427470 102 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 OR4K11P-201ENST00000431829 904 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 S100A11P2-201ENST00000467589 312 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC080014.1-201ENST00000496877 1201 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC117525.1-201ENST00000515228 503 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 CKS1BP7-201ENST00000522230 235 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC087241.2-201ENST00000535801 324 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC106028.5-201ENST00000610332 395 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC245884.12-201ENST00000615364 59 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 CR381572.1-201ENST00000625098 102 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 CRYM-AS1-204ENST00000637983 556 ntBASIC1.95□□□□□ -2.1
HIST1H1AQ02539 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms