Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AP003467.2-201ENST00000520175 319 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 AL139286.1-201ENST00000604465 483 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 FRG1DP-201ENST00000635586 771 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HSPG2P98160 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HSPG2P98160 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
HSPG2P98160 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 AC067805.1-201ENST00000559344 470 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.26□□□□□ -2.21
HSPG2P98160 AC009831.4-201ENST00000620744 325 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.26□□□□□ -2.21
HSPG2P98160 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HSPG2P98160 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 RNU4-74P-201ENST00000411280 161 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 FO393414.1-201ENST00000428697 1184 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 RPL21P18-201ENST00000469899 480 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.26□□□□□ -2.21
HSPG2P98160 AC004486.1-201ENST00000546846 233 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.26□□□□□ -2.21
HSPG2P98160 MIR8081-201ENST00000611533 95 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 MTND5P35-201ENST00000557537 1720 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HSPG2P98160 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
HSPG2P98160 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
HSPG2P98160 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.26□□□□□ -2.21
HSPG2P98160 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
HSPG2P98160 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 U8.8-201ENST00000365399 135 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.26□□□□□ -2.21
HSPG2P98160 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 RPL9P33-201ENST00000484311 566 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 RN7SKP40-201ENST00000517211 242 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 OR1S1-201ENST00000624470 978 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
HSPG2P98160 AC091152.2-201ENST00000591628 2569 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.25□□□□□ -2.21
HSPG2P98160 SET-203ENST00000372688 801 ntTSL 2 BASIC1.25□□□□□ -2.21
HSPG2P98160 RNU1-138P-201ENST00000384093 164 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.25□□□□□ -2.21
HSPG2P98160 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.25□□□□□ -2.21
HSPG2P98160 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.25□□□□□ -2.21
HSPG2P98160 RPL21P134-201ENST00000453468 483 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 RPS27P27-201ENST00000498779 255 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 SUMO2P4-201ENST00000504193 276 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 AC011352.3-201ENST00000505162 593 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.25□□□□□ -2.21
HSPG2P98160 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.25□□□□□ -2.21
HSPG2P98160 AC110588.1-201ENST00000559699 137 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.25□□□□□ -2.21
HSPG2P98160 AL627309.6-201ENST00000606857 840 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.25□□□□□ -2.21
HSPG2P98160 SETP10-201ENST00000424368 814 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 PPP1R2P5-201ENST00000457256 603 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 NF1P5-201ENST00000588287 448 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 AC010872.1-201ENST00000624225 675 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.25□□□□□ -2.21
HSPG2P98160 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.25□□□□□ -2.21
HSPG2P98160 YWHAZP7-201ENST00000436906 631 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.25□□□□□ -2.21
HSPG2P98160 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.25□□□□□ -2.21
HSPG2P98160 AC008126.1-201ENST00000549019 480 ntBASIC1.25□□□□□ -2.21
HSPG2P98160 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HSPG2P98160 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.25□□□□□ -2.21
HSPG2P98160 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
HSPG2P98160 Y_RNA.205-201ENST00000364128 113 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.24□□□□□ -2.21
HSPG2P98160 OR4K11P-201ENST00000431829 904 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.24□□□□□ -2.21
HSPG2P98160 AL137159.1-201ENST00000452808 512 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 RN7SL297P-201ENST00000483161 293 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 RNA5SP220-201ENST00000516298 104 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 IGKV2D-36-201ENST00000518643 226 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HSPG2P98160 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.24□□□□□ -2.21
HSPG2P98160 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms