Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.52□□□□□ -1.53
USP11P51784 AC074085.1-201ENST00000413598 418 ntBASIC5.52□□□□□ -1.53
USP11P51784 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.52□□□□□ -1.53
USP11P51784 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.52□□□□□ -1.53
USP11P51784 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.52□□□□□ -1.53
USP11P51784 YWHAZP8-201ENST00000436935 731 ntBASIC5.52□□□□□ -1.53
USP11P51784 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.52□□□□□ -1.53
USP11P51784 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.52□□□□□ -1.53
USP11P51784 AC107399.1-201ENST00000451226 265 ntBASIC5.52□□□□□ -1.53
USP11P51784 NANOGP10-201ENST00000453325 895 ntBASIC5.52□□□□□ -1.53
USP11P51784 ELOCP24-201ENST00000456370 334 ntBASIC5.52□□□□□ -1.53
USP11P51784 RN7SL558P-201ENST00000497468 299 ntBASIC5.52□□□□□ -1.53
USP11P51784 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP11P51784 AC098591.2-201ENST00000510152 315 ntBASIC5.52□□□□□ -1.53
USP11P51784 AC026782.1-201ENST00000512952 449 ntBASIC5.52□□□□□ -1.53
USP11P51784 ENPP7P9-201ENST00000514456 627 ntBASIC5.52□□□□□ -1.53
USP11P51784 RNU6-273P-201ENST00000516937 96 ntBASIC5.52□□□□□ -1.53
USP11P51784 RNU6-1271P-201ENST00000517049 105 ntBASIC5.52□□□□□ -1.53
USP11P51784 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.52□□□□□ -1.53
USP11P51784 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.52□□□□□ -1.53
USP11P51784 AC005868.1-201ENST00000536421 331 ntBASIC5.52□□□□□ -1.53
USP11P51784 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.52□□□□□ -1.53
USP11P51784 AL049839.1-201ENST00000556151 657 ntBASIC5.52□□□□□ -1.53
USP11P51784 UBE2L4-201ENST00000587688 464 ntBASIC5.52□□□□□ -1.53
USP11P51784 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.52□□□□□ -1.53
USP11P51784 AC008782.1-201ENST00000603386 430 ntBASIC5.52□□□□□ -1.53
USP11P51784 AL022099.1-201ENST00000604551 712 ntBASIC5.52□□□□□ -1.53
USP11P51784 AL022401.1-201ENST00000619498 108 ntBASIC5.52□□□□□ -1.53
USP11P51784 AC022418.1-201ENST00000624118 445 ntBASIC5.52□□□□□ -1.53
USP11P51784 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP11P51784 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
USP11P51784 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.52□□□□□ -1.53
USP11P51784 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP11P51784 AC090337.1-201ENST00000579651 2074 ntBASIC5.52□□□□□ -1.53
USP11P51784 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP11P51784 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
USP11P51784 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP11P51784 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP11P51784 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP11P51784 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.51□□□□□ -1.53
USP11P51784 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP11P51784 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP11P51784 SDAD1P1-202ENST00000524156 2051 ntBASIC5.51□□□□□ -1.53
USP11P51784 AC009643.2-201ENST00000603543 1448 ntBASIC5.51□□□□□ -1.53
USP11P51784 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP11P51784 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.51□□□□□ -1.53
USP11P51784 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP11P51784 RPL32P3-201ENST00000359025 275 ntBASIC5.51□□□□□ -1.53
USP11P51784 Y_RNA.158-201ENST00000363651 101 ntBASIC5.51□□□□□ -1.53
USP11P51784 RNU6-702P-201ENST00000364982 107 ntBASIC5.51□□□□□ -1.53
USP11P51784 RNU6-26P-201ENST00000383985 107 ntBASIC5.51□□□□□ -1.53
USP11P51784 RNA5SP87-201ENST00000384155 118 ntBASIC5.51□□□□□ -1.53
USP11P51784 RNU6-1013P-201ENST00000384180 107 ntBASIC5.51□□□□□ -1.53
USP11P51784 Y_RNA.557-201ENST00000384680 107 ntBASIC5.51□□□□□ -1.53
USP11P51784 MIR454-201ENST00000390180 115 ntBASIC5.51□□□□□ -1.53
USP11P51784 RNA5SP113-201ENST00000410486 84 ntBASIC5.51□□□□□ -1.53
USP11P51784 RPL37P10-201ENST00000412884 288 ntBASIC5.51□□□□□ -1.53
USP11P51784 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.51□□□□□ -1.53
USP11P51784 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.51□□□□□ -1.53
USP11P51784 RPS5P7-201ENST00000456664 608 ntBASIC5.51□□□□□ -1.53
USP11P51784 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 AL049714.1-201ENST00000466686 347 ntBASIC5.51□□□□□ -1.53
USP11P51784 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.51□□□□□ -1.53
USP11P51784 MTCYBP40-201ENST00000509390 1135 ntBASIC5.51□□□□□ -1.53
USP11P51784 RNU6-1038P-201ENST00000516516 104 ntBASIC5.51□□□□□ -1.53
USP11P51784 CDH12P4-201ENST00000517835 295 ntBASIC5.51□□□□□ -1.53
USP11P51784 CDH12P3-201ENST00000517935 295 ntBASIC5.51□□□□□ -1.53
USP11P51784 CDH12P1-201ENST00000518435 295 ntBASIC5.51□□□□□ -1.53
USP11P51784 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.51□□□□□ -1.53
USP11P51784 RANP9-201ENST00000519957 271 ntBASIC5.51□□□□□ -1.53
USP11P51784 AP003497.1-201ENST00000528472 562 ntBASIC5.51□□□□□ -1.53
USP11P51784 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP11P51784 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.51□□□□□ -1.53
USP11P51784 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.51□□□□□ -1.53
USP11P51784 AC022726.1-201ENST00000587475 207 ntBASIC5.51□□□□□ -1.53
USP11P51784 AC115085.1-201ENST00000588924 229 ntBASIC5.51□□□□□ -1.53
USP11P51784 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.51□□□□□ -1.53
USP11P51784 VN1R84P-201ENST00000593697 235 ntBASIC5.51□□□□□ -1.53
USP11P51784 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 AL031320.1-201ENST00000604177 357 ntBASIC5.51□□□□□ -1.53
USP11P51784 AL391358.1-201ENST00000605342 190 ntBASIC5.51□□□□□ -1.53
USP11P51784 AC023813.4-201ENST00000607580 580 ntBASIC5.51□□□□□ -1.53
USP11P51784 AC022893.3-201ENST00000607665 437 ntBASIC5.51□□□□□ -1.53
USP11P51784 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 AC007546.1-201ENST00000619452 559 ntBASIC5.51□□□□□ -1.53
USP11P51784 MTND5P19-201ENST00000424872 1794 ntBASIC5.51□□□□□ -1.53
USP11P51784 AL606537.1-201ENST00000607258 2011 ntBASIC5.51□□□□□ -1.53
USP11P51784 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
USP11P51784 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
USP11P51784 AC000374.1-201ENST00000434698 1745 ntBASIC5.51□□□□□ -1.53
USP11P51784 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP11P51784 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP11P51784 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms