Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ZNF519P3-201ENST00000557158 1032 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.81□□□□□ -1.8
CENPAP49450 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.81□□□□□ -1.8
CENPAP49450 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.81□□□□□ -1.8
CENPAP49450 RPL12P25-202ENST00000598100 674 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AC068790.6-201ENST00000602558 258 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AC011468.4-201ENST00000603942 409 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AL359999.1-201ENST00000604513 294 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AL354984.3-201ENST00000604803 325 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AC055876.5-201ENST00000605667 259 ntBASIC3.81□□□□□ -1.8
CENPAP49450 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.81□□□□□ -1.8
CENPAP49450 OR10AB1P-201ENST00000609613 938 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AC006023.2-201ENST00000609916 167 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AC012409.3-201ENST00000611343 981 ntBASIC3.81□□□□□ -1.8
CENPAP49450 AC008498.1-201ENST00000613012 531 ntBASIC3.81□□□□□ -1.8
CENPAP49450 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.81□□□□□ -1.8
CENPAP49450 U7.8-201ENST00000619968 63 ntBASIC3.81□□□□□ -1.8
CENPAP49450 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.81□□□□□ -1.8
CENPAP49450 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CENPAP49450 AC140479.6-201ENST00000633535 357 ntBASIC3.81□□□□□ -1.8
CENPAP49450 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.81□□□□□ -1.8
CENPAP49450 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CENPAP49450 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
CENPAP49450 AL672296.1-201ENST00000427780 2158 ntBASIC3.8□□□□□ -1.8
CENPAP49450 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CENPAP49450 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
CENPAP49450 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.8□□□□□ -1.8
CENPAP49450 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CENPAP49450 RNU6-348P-201ENST00000384386 107 ntBASIC3.8□□□□□ -1.8
CENPAP49450 MIR585-201ENST00000384887 94 ntBASIC3.8□□□□□ -1.8
CENPAP49450 RNU6-837P-201ENST00000391056 108 ntBASIC3.8□□□□□ -1.8
CENPAP49450 RNA5SP332-201ENST00000391063 115 ntBASIC3.8□□□□□ -1.8
CENPAP49450 RPS20P2-201ENST00000402520 389 ntBASIC3.8□□□□□ -1.8
CENPAP49450 TOMM22P1-201ENST00000418578 312 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.8□□□□□ -1.8
CENPAP49450 AL356387.2-201ENST00000422272 243 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.8□□□□□ -1.8
CENPAP49450 AC006548.1-201ENST00000427470 102 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.8□□□□□ -1.8
CENPAP49450 USP9YP14-201ENST00000430663 563 ntBASIC3.8□□□□□ -1.8
CENPAP49450 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 UBE2V1P13-201ENST00000436983 439 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 AL022238.1-201ENST00000442557 355 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC112653.1-201ENST00000443851 386 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 H2AFZP6-201ENST00000444403 394 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 AC098824.1-201ENST00000453565 980 ntBASIC3.8□□□□□ -1.8
CENPAP49450 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CENPAP49450 SNORD42A-201ENST00000459584 64 ntBASIC3.8□□□□□ -1.8
CENPAP49450 ACTR3P3-201ENST00000480448 893 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC021382.1-201ENST00000483523 359 ntBASIC3.8□□□□□ -1.8
CENPAP49450 LARP1BP2-201ENST00000486594 519 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC013356.1-201ENST00000489027 564 ntBASIC3.8□□□□□ -1.8
CENPAP49450 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.8□□□□□ -1.8
CENPAP49450 AK3P4-201ENST00000504283 583 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 RNU6-405P-201ENST00000516637 110 ntBASIC3.8□□□□□ -1.8
CENPAP49450 RNU6-1003P-201ENST00000517099 105 ntBASIC3.8□□□□□ -1.8
CENPAP49450 MTCYBP20-201ENST00000524239 1129 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC063950.1-201ENST00000552036 308 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 AL391156.1-201ENST00000554965 554 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AL360157.1-201ENST00000565962 87 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.8□□□□□ -1.8
CENPAP49450 AC113403.1-201ENST00000604910 193 ntBASIC3.8□□□□□ -1.8
CENPAP49450 AC013562.2-201ENST00000611632 603 ntBASIC3.8□□□□□ -1.8
CENPAP49450 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CENPAP49450 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.8□□□□□ -1.8
CENPAP49450 CR381572.1-201ENST00000625098 102 ntBASIC3.8□□□□□ -1.8
CENPAP49450 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.8□□□□□ -1.8
CENPAP49450 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.8□□□□□ -1.8
CENPAP49450 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CENPAP49450 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.8□□□□□ -1.8
CENPAP49450 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CENPAP49450 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CENPAP49450 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CENPAP49450 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
CENPAP49450 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.79□□□□□ -1.8
CENPAP49450 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CENPAP49450 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CENPAP49450 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CENPAP49450 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CENPAP49450 Y_RNA.46-201ENST00000362695 102 ntBASIC3.79□□□□□ -1.8
CENPAP49450 FCF1P10-201ENST00000407590 479 ntBASIC3.79□□□□□ -1.8
CENPAP49450 RNA5SP36-201ENST00000410197 133 ntBASIC3.79□□□□□ -1.8
CENPAP49450 RNU2-47P-201ENST00000410649 186 ntBASIC3.79□□□□□ -1.8
CENPAP49450 RN7SKP235-201ENST00000410662 305 ntBASIC3.79□□□□□ -1.8
CENPAP49450 RPL37P18-201ENST00000411602 243 ntBASIC3.79□□□□□ -1.8
CENPAP49450 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.79□□□□□ -1.8
CENPAP49450 AC092447.6-201ENST00000414578 210 ntBASIC3.79□□□□□ -1.8
CENPAP49450 SPA17P1-201ENST00000416656 452 ntBASIC3.79□□□□□ -1.8
CENPAP49450 AL139095.3-201ENST00000419672 1203 ntBASIC3.79□□□□□ -1.8
CENPAP49450 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.79□□□□□ -1.8
CENPAP49450 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.79□□□□□ -1.8
CENPAP49450 EZH2P1-201ENST00000431167 291 ntBASIC3.79□□□□□ -1.8
CENPAP49450 MRPS18BP2-201ENST00000434310 759 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms