Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC009570.1-201ENST00000609599 745 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AC023158.2-201ENST00000614876 543 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 AC073348.1-201ENST00000623002 331 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AL513185.3-201ENST00000433335 1300 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HNF4AP41235 AC097714.1-201ENST00000511272 1647 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HNF4AP41235 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HNF4AP41235 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HNF4AP41235 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HNF4AP41235 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.59□□□□□ -1.83
HNF4AP41235 RNU1-101P-201ENST00000391171 127 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AC025750.1-201ENST00000399891 379 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AL356131.1-201ENST00000405826 414 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 U3.42-201ENST00000408746 214 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AL139247.1-201ENST00000422768 325 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AL591419.1-201ENST00000427423 339 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 ATP5F1P1-201ENST00000433775 569 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.59□□□□□ -1.83
HNF4AP41235 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.59□□□□□ -1.83
HNF4AP41235 AC004801.2-202ENST00000463559 283 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HNF4AP41235 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.59□□□□□ -1.83
HNF4AP41235 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.59□□□□□ -1.83
HNF4AP41235 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.59□□□□□ -1.83
HNF4AP41235 AC104090.1-201ENST00000506341 1171 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.59□□□□□ -1.83
HNF4AP41235 CBX3P3-201ENST00000508108 532 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AC116353.3-201ENST00000511215 249 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.59□□□□□ -1.83
HNF4AP41235 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.59□□□□□ -1.83
HNF4AP41235 HSPA8P13-201ENST00000523715 472 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 OR5AK1P-201ENST00000524837 922 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.59□□□□□ -1.83
HNF4AP41235 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.59□□□□□ -1.83
HNF4AP41235 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.59□□□□□ -1.83
HNF4AP41235 HIGD1AP17-201ENST00000554576 276 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 DUXAP1-201ENST00000556632 463 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AC087465.1-201ENST00000560574 245 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.59□□□□□ -1.83
HNF4AP41235 KLKP1-201ENST00000595979 403 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AC010620.1-201ENST00000601088 1102 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 AL365503.1-201ENST00000605247 905 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 RNVU1-4-201ENST00000612985 164 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 CRYM-AS1-204ENST00000637983 556 ntBASIC3.59□□□□□ -1.83
HNF4AP41235 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.59□□□□□ -1.84
HNF4AP41235 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HNF4AP41235 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
HNF4AP41235 AC092326.2-201ENST00000624772 1561 ntBASIC3.59□□□□□ -1.84
HNF4AP41235 TAB3P1-202ENST00000452645 1634 ntBASIC3.59□□□□□ -1.84
HNF4AP41235 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.59□□□□□ -1.84
HNF4AP41235 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HNF4AP41235 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HNF4AP41235 Y_RNA.126-201ENST00000363382 111 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HNF4AP41235 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HNF4AP41235 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.58□□□□□ -1.84
HNF4AP41235 SOD2P1-201ENST00000396543 562 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 ATP5F1P3-201ENST00000397213 657 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AL354719.1-201ENST00000406535 843 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 RNU6-757P-201ENST00000410334 100 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 RNA5SP80-201ENST00000410475 111 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 RNU2-47P-201ENST00000410649 186 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AL161449.1-201ENST00000414531 1199 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 MTATP6P27-201ENST00000416987 621 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 HMGB3P20-201ENST00000417997 600 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AC006960.1-201ENST00000419980 153 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 USP9YP26-201ENST00000421008 661 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 USP9YP36-201ENST00000424581 829 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.58□□□□□ -1.84
HNF4AP41235 AC092017.2-201ENST00000427600 362 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 MTATP6P4-201ENST00000427725 675 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.58□□□□□ -1.84
HNF4AP41235 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.58□□□□□ -1.84
HNF4AP41235 MTCO3P11-201ENST00000455103 774 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.58□□□□□ -1.84
HNF4AP41235 AC010468.1-201ENST00000461022 817 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
HNF4AP41235 AC114981.1-201ENST00000503897 678 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.58□□□□□ -1.84
HNF4AP41235 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HNF4AP41235 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HNF4AP41235 SLC2A13P1-201ENST00000531560 322 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AC008011.1-201ENST00000545989 227 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AC008015.1-201ENST00000555505 465 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.58□□□□□ -1.84
HNF4AP41235 Z99497.2-201ENST00000603634 310 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AC080013.6-201ENST00000606185 215 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AC099778.2-201ENST00000610904 211 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AL592295.2-201ENST00000612578 206 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AL139418.1-201ENST00000613613 177 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 MIR6076-201ENST00000617521 113 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 MIR3974-201ENST00000637126 96 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 AP003399.1-201ENST00000637534 361 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms