Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
HADHAP40939 AC015726.1-201ENST00000602353 681 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC013444.2-201ENST00000603317 787 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC106791.2-201ENST00000604680 391 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC245389.1-201ENST00000605141 529 ntBASIC3.84□□□□□ -1.79
HADHAP40939 Z99289.3-201ENST00000605586 594 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AL355810.1-201ENST00000614629 552 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC002550.2-201ENST00000621246 394 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC131159.1-201ENST00000621854 213 ntBASIC3.84□□□□□ -1.79
HADHAP40939 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.84□□□□□ -1.79
HADHAP40939 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.84□□□□□ -1.79
HADHAP40939 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HADHAP40939 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HADHAP40939 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
HADHAP40939 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HADHAP40939 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HADHAP40939 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HADHAP40939 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HADHAP40939 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HADHAP40939 RNU6-97P-201ENST00000363387 104 ntBASIC3.83□□□□□ -1.8
HADHAP40939 ATP5F1P3-201ENST00000397213 657 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AL356421.1-201ENST00000403255 413 ntBASIC3.83□□□□□ -1.8
HADHAP40939 RPL23AP39-201ENST00000415533 405 ntBASIC3.83□□□□□ -1.8
HADHAP40939 MTND4P20-201ENST00000424125 869 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AC092447.3-201ENST00000426027 686 ntBASIC3.83□□□□□ -1.8
HADHAP40939 MTCO1P39-201ENST00000426148 480 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AC007389.2-201ENST00000434630 306 ntBASIC3.83□□□□□ -1.8
HADHAP40939 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.83□□□□□ -1.8
HADHAP40939 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 UBDP1-202ENST00000457888 382 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AL139824.2-201ENST00000458731 1095 ntBASIC3.83□□□□□ -1.8
HADHAP40939 RPL7L1P8-201ENST00000469911 741 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AC034222.1-201ENST00000494052 532 ntBASIC3.83□□□□□ -1.8
HADHAP40939 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 AC022447.3-201ENST00000506865 495 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.83□□□□□ -1.8
HADHAP40939 MTND5P4-201ENST00000514978 288 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.83□□□□□ -1.8
HADHAP40939 AC087276.1-201ENST00000529659 480 ntBASIC3.83□□□□□ -1.8
HADHAP40939 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HADHAP40939 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
HADHAP40939 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.83□□□□□ -1.8
HADHAP40939 AC008751.2-201ENST00000597885 980 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AL391497.1-201ENST00000608671 547 ntBASIC3.83□□□□□ -1.8
HADHAP40939 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
HADHAP40939 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.83□□□□□ -1.8
HADHAP40939 AC017037.3-201ENST00000625016 472 ntBASIC3.83□□□□□ -1.8
HADHAP40939 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.83□□□□□ -1.8
HADHAP40939 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HADHAP40939 RPS4XP5-202ENST00000449995 1334 ntBASIC3.83□□□□□ -1.8
HADHAP40939 AP000526.1-201ENST00000603308 1388 ntBASIC3.83□□□□□ -1.8
HADHAP40939 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.83□□□□□ -1.8
HADHAP40939 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HADHAP40939 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HADHAP40939 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HADHAP40939 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HADHAP40939 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HADHAP40939 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HADHAP40939 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.82□□□□□ -1.8
HADHAP40939 RNU6-744P-201ENST00000365557 107 ntBASIC3.82□□□□□ -1.8
HADHAP40939 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.82□□□□□ -1.8
HADHAP40939 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
HADHAP40939 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
HADHAP40939 RNU6-1316P-201ENST00000384242 108 ntBASIC3.82□□□□□ -1.8
HADHAP40939 MIR23B-201ENST00000384832 97 ntBASIC3.82□□□□□ -1.8
HADHAP40939 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HADHAP40939 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HADHAP40939 RPS3AP26-201ENST00000398259 784 ntBASIC3.82□□□□□ -1.8
HADHAP40939 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
HADHAP40939 AL590103.1-201ENST00000434488 307 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AL591503.2-201ENST00000442314 1005 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.82□□□□□ -1.8
HADHAP40939 AC006480.1-201ENST00000449887 378 ntBASIC3.82□□□□□ -1.8
HADHAP40939 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.82□□□□□ -1.8
HADHAP40939 ATG12P2-201ENST00000456830 416 ntBASIC3.82□□□□□ -1.8
HADHAP40939 SNORA84-201ENST00000459229 133 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AP001025.2-201ENST00000490908 477 ntBASIC3.82□□□□□ -1.8
HADHAP40939 RN7SL323P-201ENST00000494712 295 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AL139099.1-201ENST00000497398 403 ntBASIC3.82□□□□□ -1.8
HADHAP40939 MTCYBP35-201ENST00000503630 1137 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.82□□□□□ -1.8
HADHAP40939 POU5F1P7-201ENST00000508759 541 ntBASIC3.82□□□□□ -1.8
HADHAP40939 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.82□□□□□ -1.8
HADHAP40939 AC022483.1-201ENST00000514020 567 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.82□□□□□ -1.8
HADHAP40939 MTATP6P15-201ENST00000527233 835 ntBASIC3.82□□□□□ -1.8
HADHAP40939 HIGD1AP10-201ENST00000527837 282 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.82□□□□□ -1.8
HADHAP40939 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.82□□□□□ -1.8
HADHAP40939 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.82□□□□□ -1.8
HADHAP40939 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.82□□□□□ -1.8
HADHAP40939 SETP2-201ENST00000553886 926 ntBASIC3.82□□□□□ -1.8
HADHAP40939 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms