Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHMT2P34897 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3□□□□□ -1.93
SHMT2P34897 MIR422A-201ENST00000362286 90 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 RNU6-600P-201ENST00000362524 99 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 RNU6-492P-201ENST00000363035 104 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.99□□□□□ -1.93
SHMT2P34897 DYNLT3P1-201ENST00000378574 347 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 MIR483-201ENST00000385070 76 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 RNU6-1300P-201ENST00000391046 108 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 SAR1AP2-201ENST00000392696 594 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 RPL31P1-201ENST00000398116 372 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AC110754.1-201ENST00000399740 601 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.99□□□□□ -1.93
SHMT2P34897 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.99□□□□□ -1.93
SHMT2P34897 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.99□□□□□ -1.93
SHMT2P34897 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.99□□□□□ -1.93
SHMT2P34897 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.99□□□□□ -1.93
SHMT2P34897 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AC093155.1-201ENST00000440164 826 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AL671855.1-201ENST00000446875 1203 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.99□□□□□ -1.93
SHMT2P34897 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.99□□□□□ -1.93
SHMT2P34897 MTND3P3-201ENST00000505004 126 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.99□□□□□ -1.93
SHMT2P34897 MTND4LP22-201ENST00000508209 276 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 SNORA74D-201ENST00000516404 141 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.99□□□□□ -1.93
SHMT2P34897 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.99□□□□□ -1.93
SHMT2P34897 SYF2P1-201ENST00000550658 413 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.99□□□□□ -1.93
SHMT2P34897 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SHMT2P34897 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.99□□□□□ -1.93
SHMT2P34897 AC073387.2-201ENST00000604797 784 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AC112220.2-201ENST00000605513 533 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 AC092954.1-201ENST00000609121 445 ntBASIC2.99□□□□□ -1.93
SHMT2P34897 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.99□□□□□ -1.93
SHMT2P34897 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHMT2P34897 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHMT2P34897 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHMT2P34897 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHMT2P34897 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.98□□□□□ -1.93
SHMT2P34897 AP005901.5-201ENST00000545779 1796 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHMT2P34897 RNA5SP258-201ENST00000362750 119 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 SNORD82-201ENST00000365530 70 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 RNU6-821P-201ENST00000390995 107 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 U3.29-201ENST00000391296 212 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AL138885.1-201ENST00000405921 675 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.98□□□□□ -1.93
SHMT2P34897 GTF2IP3-201ENST00000433887 494 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 GTF2IP7-202ENST00000436677 309 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.98□□□□□ -1.93
SHMT2P34897 ELOCP13-201ENST00000443934 329 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 GAPDHP27-201ENST00000447427 1020 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.98□□□□□ -1.93
SHMT2P34897 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.98□□□□□ -1.93
SHMT2P34897 RPS24P6-201ENST00000452670 400 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.98□□□□□ -1.93
SHMT2P34897 HMGN2P16-201ENST00000456802 261 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.98□□□□□ -1.93
SHMT2P34897 AC068724.1-201ENST00000487100 792 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC093767.1-201ENST00000504523 156 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SHMT2P34897 SNORA19.3-201ENST00000516165 130 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.98□□□□□ -1.93
SHMT2P34897 AC010376.1-201ENST00000522101 334 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.98□□□□□ -1.93
SHMT2P34897 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.98□□□□□ -1.93
SHMT2P34897 TMF1P1-201ENST00000576058 373 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 MIR3908-201ENST00000579798 126 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 MIR3690-201ENST00000580266 75 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.98□□□□□ -1.93
SHMT2P34897 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.98□□□□□ -1.93
SHMT2P34897 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.98□□□□□ -1.93
SHMT2P34897 AC103881.1-201ENST00000603476 538 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC006329.2-201ENST00000611491 394 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AL162274.2-201ENST00000614406 332 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC084035.1-201ENST00000634543 607 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 MTND2P41-201ENST00000637599 773 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AC099654.8-201ENST00000637757 681 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.98□□□□□ -1.93
SHMT2P34897 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.98□□□□□ -1.93
SHMT2P34897 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHMT2P34897 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SHMT2P34897 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.98□□□□□ -1.93
SHMT2P34897 AP001350.1-201ENST00000601906 1524 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 AL353743.1-202ENST00000431724 1695 ntBASIC2.98□□□□□ -1.93
SHMT2P34897 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
SHMT2P34897 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHMT2P34897 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHMT2P34897 NUP58P1-201ENST00000502546 1738 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHMT2P34897 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHMT2P34897 MIR22-201ENST00000362190 85 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 RNU5E-10P-201ENST00000363506 118 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 RNU4-51P-201ENST00000364206 140 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 SNORA71.1-201ENST00000364523 117 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SHMT2P34897 SNORD67-201ENST00000390833 111 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms