Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SLC6A4P31645 DUXAP9-208ENST00000622815 614 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC6A4P31645 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
SLC6A4P31645 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
SLC6A4P31645 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC104118.1-201ENST00000607625 1589 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC6A4P31645 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC6A4P31645 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 LARP1BP1-201ENST00000506036 1359 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 RNU5E-1-201ENST00000362477 120 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 RNY1P12-201ENST00000364251 105 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 SNORD66.1-201ENST00000391230 76 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 SNORA48.7-201ENST00000391302 135 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 DDX18P3-201ENST00000404856 2007 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 MIR1250-201ENST00000408098 113 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AL139413.1-201ENST00000421309 217 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 MTCO1P20-201ENST00000425366 358 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC137499.1-201ENST00000427602 88 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC104850.1-201ENST00000435940 476 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC6A4P31645 USP9YP15-201ENST00000442391 422 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC6A4P31645 AC073587.1-201ENST00000447093 876 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC6A4P31645 RPL38P1-201ENST00000460914 211 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC6A4P31645 AC087385.1-201ENST00000475062 312 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SLC6A4P31645 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC6A4P31645 AC010587.1-201ENST00000505809 469 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC6A4P31645 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC6A4P31645 SNORA31.9-201ENST00000516429 84 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 RN7SKP277-201ENST00000516895 283 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC6A4P31645 AP003072.2-201ENST00000527756 676 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC6A4P31645 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC6A4P31645 TVP23BP1-201ENST00000557500 617 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 MIR3118-1-201ENST00000581787 76 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC093227.2-201ENST00000589357 285 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC6A4P31645 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.42□□□□□ -1.7
SLC6A4P31645 AL161729.3-201ENST00000603533 673 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AL365503.1-201ENST00000605247 905 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC055876.5-201ENST00000605667 259 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC023043.4-201ENST00000612081 449 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 AC092794.2-201ENST00000620933 563 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 AC017104.4-201ENST00000636283 1592 ntBASIC4.42□□□□□ -1.7
SLC6A4P31645 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC6A4P31645 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC6A4P31645 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC6A4P31645 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC6A4P31645 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SLC6A4P31645 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC6A4P31645 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
SLC6A4P31645 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC6A4P31645 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC6A4P31645 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SLC6A4P31645 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC6A4P31645 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC6A4P31645 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC6A4P31645 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC6A4P31645 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC6A4P31645 RNU1-20P-201ENST00000363314 162 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SLC6A4P31645 SNORA20.2-201ENST00000383922 131 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SLC6A4P31645 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC6A4P31645 AL603766.1-201ENST00000407763 664 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC6A4P31645 ZNF863P-201ENST00000426746 417 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC6A4P31645 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC6A4P31645 IFNWP4-201ENST00000453148 294 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 RPS20P24-201ENST00000457473 361 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 RPS4XP10-201ENST00000465034 731 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 RPL23AP65-201ENST00000475608 468 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC6A4P31645 RPL21P129-201ENST00000491732 478 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 COX7A2P2-201ENST00000505291 250 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC6A4P31645 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC6A4P31645 AC021146.3-201ENST00000511911 260 ntBASIC4.41□□□□□ -1.7
SLC6A4P31645 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.41□□□□□ -1.7
SLC6A4P31645 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms