Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 AL138713.1-201ENST00000624026 2130 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 MTND5P26-201ENST00000426018 1752 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
CNGA1P29973 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.93□□□□□ -1.62
CNGA1P29973 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 RNA5SP130-201ENST00000364431 114 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CNGA1P29973 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 RNU5A-6P-201ENST00000384136 116 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 MIR19A-201ENST00000384878 82 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 RNA5SP372-201ENST00000390836 115 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 RPL21P65-201ENST00000406094 466 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 RNA5SP36-201ENST00000410197 133 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 RN7SKP159-201ENST00000410657 292 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.93□□□□□ -1.62
CNGA1P29973 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.93□□□□□ -1.62
CNGA1P29973 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 HMGN2P21-201ENST00000447764 270 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC010469.1-201ENST00000463864 576 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC105252.1-201ENST00000503089 286 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.93□□□□□ -1.62
CNGA1P29973 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.93□□□□□ -1.62
CNGA1P29973 AC091133.4-201ENST00000511142 308 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC107934.1-201ENST00000522215 217 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.93□□□□□ -1.62
CNGA1P29973 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.93□□□□□ -1.62
CNGA1P29973 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.93□□□□□ -1.62
CNGA1P29973 AL121603.1-201ENST00000553815 142 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.93□□□□□ -1.62
CNGA1P29973 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.93□□□□□ -1.62
CNGA1P29973 AC010546.1-201ENST00000569391 485 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AP001429.1-201ENST00000602568 530 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC025165.5-201ENST00000602802 578 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 TUG1_1.1-201ENST00000610654 145 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CNGA1P29973 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.93□□□□□ -1.62
CNGA1P29973 AC072046.2-201ENST00000618366 268 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC112204.3-201ENST00000623822 332 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC067931.1-201ENST00000624190 671 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AL159972.1-201ENST00000625150 448 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC110994.2-201ENST00000635481 492 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 AC244258.1-201ENST00000637553 1071 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.93□□□□□ -1.62
CNGA1P29973 AC139769.1-204ENST00000472297 1931 ntBASIC4.93□□□□□ -1.62
CNGA1P29973 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNGA1P29973 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CNGA1P29973 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CNGA1P29973 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNGA1P29973 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 AL133243.3-201ENST00000617415 3004 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNGA1P29973 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNGA1P29973 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CNGA1P29973 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CNGA1P29973 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNGA1P29973 SNORA70.4-201ENST00000365509 134 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 RPS3AP36-201ENST00000398190 775 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AL583835.1-201ENST00000399570 407 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 MTND1P21-201ENST00000412991 285 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC108032.1-201ENST00000416706 207 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 OR1AA1P-201ENST00000419597 916 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.92□□□□□ -1.62
CNGA1P29973 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.92□□□□□ -1.62
CNGA1P29973 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 BTF3P10-201ENST00000433415 495 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CNGA1P29973 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.92□□□□□ -1.62
CNGA1P29973 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 TPT1P14-201ENST00000448018 505 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 NANOGNBP1-201ENST00000448444 480 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 AC007967.1-201ENST00000455422 1159 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 RN7SL812P-201ENST00000493791 279 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 RPL7P23-201ENST00000493874 747 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 RN7SL691P-201ENST00000494487 301 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AL358832.1-201ENST00000497800 389 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.92□□□□□ -1.62
CNGA1P29973 RNA5SP519-201ENST00000516480 119 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 OR4T1P-201ENST00000554933 911 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms