Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RNU5A-6P-201ENST00000384136 116 ntBASIC4.42□□□□□ -1.7
CTGFP29279 RNU6-297P-201ENST00000384636 107 ntBASIC4.42□□□□□ -1.7
CTGFP29279 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTGFP29279 SOD2P1-201ENST00000396543 562 ntBASIC4.42□□□□□ -1.7
CTGFP29279 RN7SKP266-201ENST00000410232 287 ntBASIC4.42□□□□□ -1.7
CTGFP29279 Y_RNA.598-201ENST00000410480 95 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.42□□□□□ -1.7
CTGFP29279 USP9YP13-201ENST00000417797 480 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC099336.2-201ENST00000422457 254 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AL356583.2-201ENST00000426536 280 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AL022238.1-201ENST00000442557 355 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC244505.5-201ENST00000443639 207 ntBASIC4.42□□□□□ -1.7
CTGFP29279 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTGFP29279 RPL21P23-201ENST00000446654 460 ntBASIC4.42□□□□□ -1.7
CTGFP29279 USP9YP12-201ENST00000450481 570 ntBASIC4.42□□□□□ -1.7
CTGFP29279 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.42□□□□□ -1.7
CTGFP29279 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.42□□□□□ -1.7
CTGFP29279 AC099560.2-201ENST00000457554 255 ntBASIC4.42□□□□□ -1.7
CTGFP29279 RNU7-136P-201ENST00000458819 69 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC026410.2-201ENST00000460281 156 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AP000893.1-201ENST00000474462 794 ntBASIC4.42□□□□□ -1.7
CTGFP29279 LARP1BP2-201ENST00000486594 519 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC108022.1-201ENST00000493466 478 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC108941.1-201ENST00000502853 530 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.42□□□□□ -1.7
CTGFP29279 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.42□□□□□ -1.7
CTGFP29279 AC018797.3-201ENST00000513388 1241 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC046134.1-201ENST00000514454 666 ntBASIC4.42□□□□□ -1.7
CTGFP29279 RN7SKP18-201ENST00000516005 275 ntBASIC4.42□□□□□ -1.7
CTGFP29279 Y_RNA.701-201ENST00000516812 110 ntBASIC4.42□□□□□ -1.7
CTGFP29279 ZNF705CP-201ENST00000530515 889 ntBASIC4.42□□□□□ -1.7
CTGFP29279 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.42□□□□□ -1.7
CTGFP29279 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.42□□□□□ -1.7
CTGFP29279 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.42□□□□□ -1.7
CTGFP29279 MIR5697-201ENST00000578045 78 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.42□□□□□ -1.7
CTGFP29279 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.42□□□□□ -1.7
CTGFP29279 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.42□□□□□ -1.7
CTGFP29279 DUXAP4-201ENST00000603046 613 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC097468.3-201ENST00000607956 456 ntBASIC4.42□□□□□ -1.7
CTGFP29279 U4.5-201ENST00000617137 123 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC108479.2-201ENST00000617314 601 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AL139089.1-201ENST00000620372 975 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC006378.2-201ENST00000623178 2476 ntBASIC4.42□□□□□ -1.7
CTGFP29279 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTGFP29279 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.42□□□□□ -1.7
CTGFP29279 MTND5P26-201ENST00000426018 1752 ntBASIC4.42□□□□□ -1.7
CTGFP29279 AC005005.4-201ENST00000623789 16698 ntBASIC4.42□□□□□ -1.7
CTGFP29279 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.42□□□□□ -1.7
CTGFP29279 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CTGFP29279 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.42□□□□□ -1.7
CTGFP29279 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CTGFP29279 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTGFP29279 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CTGFP29279 RNU6-777P-201ENST00000364265 104 ntBASIC4.41□□□□□ -1.7
CTGFP29279 MIR128-1-201ENST00000384921 82 ntBASIC4.41□□□□□ -1.7
CTGFP29279 MT-TR-201ENST00000387439 65 ntBASIC4.41□□□□□ -1.7
CTGFP29279 MIR320C1-201ENST00000408566 88 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.41□□□□□ -1.7
CTGFP29279 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.41□□□□□ -1.7
CTGFP29279 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.41□□□□□ -1.7
CTGFP29279 AF228730.4-201ENST00000421457 183 ntBASIC4.41□□□□□ -1.7
CTGFP29279 ISCA1P1-201ENST00000426679 387 ntBASIC4.41□□□□□ -1.7
CTGFP29279 HMGN2P27-201ENST00000427352 270 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AC109583.1-201ENST00000432156 268 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.41□□□□□ -1.7
CTGFP29279 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 EIF4A1P11-201ENST00000451239 222 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 snoU109.1-201ENST00000459339 135 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AP001486.1-201ENST00000463339 476 ntBASIC4.41□□□□□ -1.7
CTGFP29279 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.41□□□□□ -1.7
CTGFP29279 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTGFP29279 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.41□□□□□ -1.7
CTGFP29279 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.41□□□□□ -1.7
CTGFP29279 AF131216.2-201ENST00000512316 564 ntBASIC4.41□□□□□ -1.7
CTGFP29279 RN7SKP244-201ENST00000516513 307 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AC022695.1-201ENST00000522089 237 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.41□□□□□ -1.7
CTGFP29279 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.41□□□□□ -1.7
CTGFP29279 ZNF519P2-201ENST00000557032 169 ntBASIC4.41□□□□□ -1.7
CTGFP29279 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.41□□□□□ -1.7
CTGFP29279 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.41□□□□□ -1.7
CTGFP29279 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.41□□□□□ -1.7
CTGFP29279 AC008752.3-201ENST00000588113 712 ntBASIC4.41□□□□□ -1.7
CTGFP29279 NF1P5-201ENST00000588287 448 ntBASIC4.41□□□□□ -1.7
CTGFP29279 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.41□□□□□ -1.7
CTGFP29279 BNIP3P8-201ENST00000597863 560 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AP001429.1-201ENST00000602568 530 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AL022154.1-201ENST00000604698 785 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 AL359535.1-201ENST00000612100 1087 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AC243312.2-201ENST00000623340 601 ntBASIC4.41□□□□□ -1.7
CTGFP29279 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.41□□□□□ -1.7
CTGFP29279 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.41□□□□□ -1.7
CTGFP29279 AL445437.1-201ENST00000623157 3087 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms