Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC3P19447 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
ERCC3P19447 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC3P19447 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ERCC3P19447 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 AC073544.1-201ENST00000600110 1595 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.68□□□□□ -1.5
ERCC3P19447 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC3P19447 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC3P19447 RNU6-179P-201ENST00000363350 107 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 SNORA23-201ENST00000365128 182 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 SNORA62-201ENST00000365493 153 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 RNU5E-6P-201ENST00000365574 115 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC3P19447 NRBF2P3-201ENST00000432731 865 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC3P19447 MTCO3P45-201ENST00000443036 613 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.68□□□□□ -1.5
ERCC3P19447 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.68□□□□□ -1.5
ERCC3P19447 AL356010.1-201ENST00000456364 102 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC091180.1-201ENST00000462104 372 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC010326.1-201ENST00000462726 602 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC022795.1-201ENST00000473808 480 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC010631.1-201ENST00000474150 156 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 RPS29P25-201ENST00000481709 171 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
ERCC3P19447 NIPA2P2-201ENST00000496376 1083 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC3P19447 RNA5SP392-201ENST00000516905 112 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC008489.1-201ENST00000524271 483 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC022882.1-201ENST00000532142 501 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC3P19447 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC130324.3-201ENST00000614165 542 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC3P19447 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC3P19447 AC093648.1-201ENST00000623546 606 ntBASIC5.68□□□□□ -1.5
ERCC3P19447 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC3P19447 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC3P19447 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ERCC3P19447 MAPK10-263ENST00000641052 4307 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ERCC3P19447 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ERCC3P19447 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ERCC3P19447 TXNP7-201ENST00000406296 293 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 RN7SKP16-201ENST00000410180 299 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 AC005154.2-201ENST00000438110 379 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 MTND1P18-201ENST00000448191 573 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.67□□□□□ -1.5
ERCC3P19447 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.67□□□□□ -1.5
ERCC3P19447 RN7SL385P-201ENST00000468873 276 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 RPL12P20-201ENST00000475538 479 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AC041039.1-201ENST00000485656 536 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.67□□□□□ -1.5
ERCC3P19447 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.67□□□□□ -1.5
ERCC3P19447 RNA5SP503-201ENST00000517047 117 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AP004371.1-201ENST00000525240 214 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
ERCC3P19447 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.67□□□□□ -1.5
ERCC3P19447 NCAPGP2-201ENST00000557911 754 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.67□□□□□ -1.5
ERCC3P19447 MIR5096-201ENST00000583713 70 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.67□□□□□ -1.5
ERCC3P19447 AC009994.1-201ENST00000606889 253 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AC083809.1-201ENST00000615051 472 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 MIR6758-201ENST00000620653 63 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 AC110801.1-201ENST00000623590 212 ntBASIC5.67□□□□□ -1.5
ERCC3P19447 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.67□□□□□ -1.5
ERCC3P19447 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ERCC3P19447 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ERCC3P19447 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERCC3P19447 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC3P19447 AL354685.2-201ENST00000448218 1447 ntBASIC5.66□□□□□ -1.5
ERCC3P19447 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.66□□□□□ -1.5
ERCC3P19447 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC3P19447 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ERCC3P19447 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC3P19447 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ERCC3P19447 AC067945.1-201ENST00000342609 618 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms