Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SNORA74D-201ENST00000516404 141 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
XRCC1P18887 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.18□□□□□ -1.9
XRCC1P18887 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AL121603.1-201ENST00000553815 142 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC138915.2-201ENST00000569776 97 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 MIR3690-201ENST00000580266 75 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 MIR3200-201ENST00000580767 85 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC012493.2-201ENST00000595083 291 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AC124312.4-201ENST00000605533 310 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC023158.2-201ENST00000614876 543 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
XRCC1P18887 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
XRCC1P18887 MTCO1P23-201ENST00000415223 1526 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC107982.1-201ENST00000507171 1300 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
XRCC1P18887 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XRCC1P18887 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XRCC1P18887 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
XRCC1P18887 RNU6-600P-201ENST00000362524 99 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 RNU1-70P-201ENST00000362618 164 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 RNU6-216P-201ENST00000363282 104 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
XRCC1P18887 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XRCC1P18887 SNORA40.2-201ENST00000390847 128 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AC016769.3-201ENST00000396562 315 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 ARF4P3-201ENST00000397387 509 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
XRCC1P18887 RAD23BP2-201ENST00000416003 1207 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 RPL21P66-201ENST00000426566 466 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AL512649.1-201ENST00000428997 581 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.17□□□□□ -1.9
XRCC1P18887 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.17□□□□□ -1.9
XRCC1P18887 AC092757.1-201ENST00000467293 467 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 VN1R17P-201ENST00000472048 1090 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 RN7SL283P-201ENST00000489055 303 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.17□□□□□ -1.9
XRCC1P18887 RNU6-1225P-201ENST00000516336 65 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 RNU6-1073P-201ENST00000517182 106 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AC021451.1-201ENST00000523498 1129 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.17□□□□□ -1.9
XRCC1P18887 AC125611.1-201ENST00000549563 229 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.17□□□□□ -1.9
XRCC1P18887 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
XRCC1P18887 ZNF415P1-201ENST00000582279 1166 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.17□□□□□ -1.9
XRCC1P18887 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.17□□□□□ -1.9
XRCC1P18887 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.17□□□□□ -1.9
XRCC1P18887 AC092650.2-201ENST00000619984 902 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 AC099654.9-201ENST00000637055 678 ntBASIC3.17□□□□□ -1.9
XRCC1P18887 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.17□□□□□ -1.9
XRCC1P18887 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.17□□□□□ -1.9
XRCC1P18887 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
XRCC1P18887 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
XRCC1P18887 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.16□□□□□ -1.9
XRCC1P18887 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
XRCC1P18887 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 RNU6-657P-201ENST00000383904 107 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 RNU6-878P-201ENST00000384578 110 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 RNU6-925P-201ENST00000384629 104 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
XRCC1P18887 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.16□□□□□ -1.9
XRCC1P18887 AL449283.1-202ENST00000418249 604 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 TOMM22P1-201ENST00000418578 312 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.16□□□□□ -1.9
XRCC1P18887 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 RPL7P44-201ENST00000424827 742 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 RPL23AP74-201ENST00000437246 471 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 HMGB1P12-201ENST00000438594 598 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 AL662791.1-201ENST00000441992 928 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.16□□□□□ -1.9
XRCC1P18887 ELOCP23-201ENST00000452014 332 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 RFC5P1-201ENST00000454419 874 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.16□□□□□ -1.9
XRCC1P18887 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 MTCO3P35-201ENST00000485582 781 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.16□□□□□ -1.9
XRCC1P18887 AC118282.1-201ENST00000506408 765 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 HMGB3P15-201ENST00000507326 574 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms