Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC018645.1-201ENST00000505003 109 ntBASIC4.74□□□□□ -1.65
ATF4P18848 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.74□□□□□ -1.65
ATF4P18848 TBCAP3-201ENST00000512475 312 ntBASIC4.74□□□□□ -1.65
ATF4P18848 RNA5SP464-201ENST00000516251 108 ntBASIC4.74□□□□□ -1.65
ATF4P18848 Y_RNA.682-201ENST00000516457 100 ntBASIC4.74□□□□□ -1.65
ATF4P18848 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.74□□□□□ -1.65
ATF4P18848 AL133399.1-201ENST00000527476 298 ntBASIC4.74□□□□□ -1.65
ATF4P18848 AC036111.2-201ENST00000533247 901 ntBASIC4.74□□□□□ -1.65
ATF4P18848 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.74□□□□□ -1.65
ATF4P18848 MIR548AC-201ENST00000585049 88 ntBASIC4.74□□□□□ -1.65
ATF4P18848 AC020916.2-201ENST00000591242 360 ntBASIC4.74□□□□□ -1.65
ATF4P18848 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.74□□□□□ -1.65
ATF4P18848 MIR6811-201ENST00000620409 58 ntBASIC4.74□□□□□ -1.65
ATF4P18848 AC111152.1-202ENST00000635848 339 ntBASIC4.74□□□□□ -1.65
ATF4P18848 Z99571.1-201ENST00000636677 394 ntBASIC4.74□□□□□ -1.65
ATF4P18848 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
ATF4P18848 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATF4P18848 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.74□□□□□ -1.65
ATF4P18848 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.74□□□□□ -1.65
ATF4P18848 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATF4P18848 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ATF4P18848 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 ZNF285B-201ENST00000561698 1767 ntBASIC4.73□□□□□ -1.65
ATF4P18848 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.73□□□□□ -1.65
ATF4P18848 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATF4P18848 AC063976.2-201ENST00000425667 3556 ntBASIC4.73□□□□□ -1.65
ATF4P18848 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
ATF4P18848 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATF4P18848 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATF4P18848 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ATF4P18848 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.73□□□□□ -1.65
ATF4P18848 Y_RNA.480-201ENST00000384364 102 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AL133270.1-201ENST00000402635 279 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AL139397.2-201ENST00000404529 772 ntBASIC4.73□□□□□ -1.65
ATF4P18848 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ATF4P18848 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF4P18848 RPL21P90-201ENST00000415692 466 ntBASIC4.73□□□□□ -1.65
ATF4P18848 RPL21P50-201ENST00000417698 477 ntBASIC4.73□□□□□ -1.65
ATF4P18848 RPS7P8-201ENST00000418311 581 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.73□□□□□ -1.65
ATF4P18848 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 RPL23AP89-201ENST00000439324 255 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC073587.1-201ENST00000447093 876 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 AC079168.1-201ENST00000458741 345 ntBASIC4.73□□□□□ -1.65
ATF4P18848 RN7SL326P-201ENST00000477493 296 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC124945.1-201ENST00000485133 188 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF4P18848 RNA5SP471-201ENST00000516971 106 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF4P18848 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 SMIM12P1-201ENST00000603004 274 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC012119.1-201ENST00000603184 222 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC012368.3-201ENST00000604190 219 ntBASIC4.73□□□□□ -1.65
ATF4P18848 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 AC126915.2-201ENST00000610957 190 ntBASIC4.73□□□□□ -1.65
ATF4P18848 MIR6778-201ENST00000617912 73 ntBASIC4.73□□□□□ -1.65
ATF4P18848 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF4P18848 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF4P18848 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF4P18848 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ATF4P18848 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF4P18848 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF4P18848 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF4P18848 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ATF4P18848 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ATF4P18848 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.72□□□□□ -1.65
ATF4P18848 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
ATF4P18848 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF4P18848 RN7SKP44-201ENST00000363602 316 ntBASIC4.72□□□□□ -1.65
ATF4P18848 RNU6-371P-201ENST00000364283 108 ntBASIC4.72□□□□□ -1.65
ATF4P18848 Y_RNA.245-201ENST00000364493 95 ntBASIC4.72□□□□□ -1.65
ATF4P18848 XGY1-201ENST00000381172 446 ntBASIC4.72□□□□□ -1.65
ATF4P18848 RNU6-741P-201ENST00000383889 107 ntBASIC4.72□□□□□ -1.65
ATF4P18848 MIR1275-201ENST00000408770 80 ntBASIC4.72□□□□□ -1.65
ATF4P18848 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATF4P18848 AC074085.1-201ENST00000413598 418 ntBASIC4.72□□□□□ -1.65
ATF4P18848 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.72□□□□□ -1.65
ATF4P18848 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF4P18848 AC005019.1-201ENST00000436455 431 ntBASIC4.72□□□□□ -1.65
ATF4P18848 PTMAP6-201ENST00000439110 327 ntBASIC4.72□□□□□ -1.65
ATF4P18848 AL138899.2-201ENST00000439139 499 ntBASIC4.72□□□□□ -1.65
ATF4P18848 POU5F1P5-201ENST00000445059 658 ntBASIC4.72□□□□□ -1.65
ATF4P18848 FRG2FP-204ENST00000453982 852 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms