Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 RPS3AP23-202ENST00000574601 686 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN1P18031 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PTPN1P18031 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
PTPN1P18031 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN1P18031 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN1P18031 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN1P18031 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
PTPN1P18031 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN1P18031 RNA5SP447-201ENST00000363749 119 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN1P18031 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN1P18031 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTPN1P18031 snosnR66.1-201ENST00000391095 99 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AL354719.1-201ENST00000406535 843 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 RPS20P15-201ENST00000412792 311 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC007390.1-201ENST00000415722 356 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN1P18031 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.81□□□□□ -1.64
PTPN1P18031 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN1P18031 ATP5JP1-201ENST00000431631 322 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 TIMM9P1-201ENST00000436122 256 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC140076.1-201ENST00000449897 361 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN1P18031 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN1P18031 RNU7-63P-201ENST00000459054 62 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 RPL21P126-201ENST00000470049 478 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 RN7SL481P-201ENST00000477764 299 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.81□□□□□ -1.64
PTPN1P18031 IGLVIV-53-201ENST00000520107 367 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 AC125611.2-201ENST00000551907 647 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 AC007566.2-201ENST00000603642 413 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC013553.2-201ENST00000604244 589 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC004853.1-201ENST00000604902 698 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 MIR378J-201ENST00000611988 109 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC112204.3-201ENST00000623822 332 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 AC006026.1-201ENST00000444025 1803 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN1P18031 CPHL1P-201ENST00000461341 3407 ntBASIC4.81□□□□□ -1.64
PTPN1P18031 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN1P18031 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN1P18031 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PTPN1P18031 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTPN1P18031 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN1P18031 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN1P18031 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTPN1P18031 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTPN1P18031 U3.22-201ENST00000391120 215 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 AL591416.1-201ENST00000404015 867 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 ELOCP19-201ENST00000411919 318 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 MTCO3P12-201ENST00000416718 547 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 AC127526.1-201ENST00000417526 366 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN1P18031 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN1P18031 EZH2P1-201ENST00000431167 291 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN1P18031 CBWD4P-201ENST00000445695 655 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 RPL23AP43-201ENST00000446445 471 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN1P18031 AC108751.2-201ENST00000469993 231 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 AC233702.1-201ENST00000482905 502 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 CEACAMP10-202ENST00000495431 496 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN1P18031 AC108043.1-201ENST00000512696 574 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 SNORD60.2-201ENST00000516883 86 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN1P18031 OR8L1P-201ENST00000534005 955 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 AC068831.4-201ENST00000556118 109 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN1P18031 AL354950.2-201ENST00000617939 290 ntBASIC4.8□□□□□ -1.64
PTPN1P18031 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN1P18031 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
PTPN1P18031 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN1P18031 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN1P18031 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
PTPN1P18031 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms