Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.303-201ENST00000364998 94 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 MIR548J-201ENST00000408833 112 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 AC008173.1-201ENST00000418901 264 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 AL159169.1-201ENST00000421119 127 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 AL513175.2-201ENST00000422071 443 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.1□□□□□ -2.07
COL6A3P12111 AL589765.3-201ENST00000446084 462 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 TMEM248P1-201ENST00000510579 951 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.1□□□□□ -2.07
COL6A3P12111 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.1□□□□□ -2.07
COL6A3P12111 MIR4644-201ENST00000579929 84 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.1□□□□□ -2.07
COL6A3P12111 AC095050.2-201ENST00000510748 1458 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 AC008568.2-201ENST00000623862 2313 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 SEPT7P7-201ENST00000420492 1301 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 BMS1P7-201ENST00000602440 1052 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 OR10AB1P-201ENST00000609613 938 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL6A3P12111 AC098934.3-201ENST00000430450 190 ntBASIC2.09□□□□□ -2.07
COL6A3P12111 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.09□□□□□ -2.07
COL6A3P12111 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.09□□□□□ -2.07
COL6A3P12111 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.09□□□□□ -2.07
COL6A3P12111 AC067805.1-201ENST00000559344 470 ntBASIC2.09□□□□□ -2.07
COL6A3P12111 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.09□□□□□ -2.07
COL6A3P12111 AC011712.1-201ENST00000588959 234 ntBASIC2.09□□□□□ -2.07
COL6A3P12111 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.09□□□□□ -2.07
COL6A3P12111 AC073136.2-201ENST00000417282 849 ntBASIC2.09□□□□□ -2.08
COL6A3P12111 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.09□□□□□ -2.08
COL6A3P12111 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.09□□□□□ -2.08
COL6A3P12111 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.08
COL6A3P12111 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL6A3P12111 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.09□□□□□ -2.08
COL6A3P12111 AL354719.1-201ENST00000406535 843 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.08□□□□□ -2.08
COL6A3P12111 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.08□□□□□ -2.08
COL6A3P12111 AL035411.2-201ENST00000604022 421 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.08□□□□□ -2.08
COL6A3P12111 MTND4P35-201ENST00000604257 1375 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.08□□□□□ -2.08
COL6A3P12111 RPL7P46-201ENST00000425129 740 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.08□□□□□ -2.08
COL6A3P12111 CDC42P1-201ENST00000456658 548 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.08□□□□□ -2.08
COL6A3P12111 AGGF1P8-201ENST00000562979 1000 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 PSMA6P4-201ENST00000603247 718 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 AL391646.1-201ENST00000603860 190 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 AC131902.3-201ENST00000611767 581 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL6A3P12111 Z99129.2-201ENST00000619967 314 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.08□□□□□ -2.08
COL6A3P12111 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL6A3P12111 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL6A3P12111 AC244033.1-201ENST00000426826 870 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 RPS24P8-201ENST00000431490 402 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.08□□□□□ -2.08
COL6A3P12111 AC125238.1-201ENST00000448842 249 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 RN7SL297P-201ENST00000483161 293 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.08□□□□□ -2.08
COL6A3P12111 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.08□□□□□ -2.08
COL6A3P12111 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.08□□□□□ -2.08
COL6A3P12111 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.08□□□□□ -2.08
COL6A3P12111 AL008729.2-201ENST00000606393 473 ntBASIC2.08□□□□□ -2.08
COL6A3P12111 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL6A3P12111 RNU6-1032P-201ENST00000384100 107 ntBASIC2.07□□□□□ -2.08
COL6A3P12111 RPL23AP55-201ENST00000498163 452 ntBASIC2.07□□□□□ -2.08
COL6A3P12111 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.07□□□□□ -2.08
COL6A3P12111 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL6A3P12111 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL6A3P12111 AC092185.1-201ENST00000491371 97 ntBASIC2.07□□□□□ -2.08
COL6A3P12111 MIR3186-201ENST00000577404 85 ntBASIC2.07□□□□□ -2.08
COL6A3P12111 MIR6767-201ENST00000637302 66 ntBASIC2.07□□□□□ -2.08
COL6A3P12111 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL6A3P12111 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
COL6A3P12111 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL6A3P12111 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.06□□□□□ -2.08
COL6A3P12111 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL6A3P12111 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.06□□□□□ -2.08
COL6A3P12111 XKRY-201ENST00000510392 1100 ntBASIC2.06□□□□□ -2.08
COL6A3P12111 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.06□□□□□ -2.08
COL6A3P12111 SCN1A-220ENST00000641603 12506 ntBASIC2.06□□□□□ -2.08
COL6A3P12111 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL6A3P12111 RNU6-53P-201ENST00000365367 106 ntBASIC2.06□□□□□ -2.08
COL6A3P12111 RPL31P41-201ENST00000477967 372 ntBASIC2.06□□□□□ -2.08
COL6A3P12111 RPL9P33-201ENST00000484311 566 ntBASIC2.06□□□□□ -2.08
COL6A3P12111 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.06□□□□□ -2.08
COL6A3P12111 OR7K1P-201ENST00000546439 926 ntBASIC2.06□□□□□ -2.08
COL6A3P12111 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL6A3P12111 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.06□□□□□ -2.08
COL6A3P12111 RNY1P4-201ENST00000384595 115 ntBASIC2.06□□□□□ -2.08
COL6A3P12111 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.06□□□□□ -2.08
COL6A3P12111 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.06□□□□□ -2.08
COL6A3P12111 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
COL6A3P12111 SNORA7.1-201ENST00000363750 139 ntBASIC2.05□□□□□ -2.08
COL6A3P12111 RN7SKP60-201ENST00000516985 239 ntBASIC2.05□□□□□ -2.08
COL6A3P12111 MIR5002-201ENST00000584713 97 ntBASIC2.05□□□□□ -2.08
COL6A3P12111 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.05□□□□□ -2.08
COL6A3P12111 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL6A3P12111 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms