Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.57□□□□□ -1.52
RARAP10276 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.57□□□□□ -1.52
RARAP10276 AC106782.4-201ENST00000568264 210 ntBASIC5.57□□□□□ -1.52
RARAP10276 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.57□□□□□ -1.52
RARAP10276 AC025588.3-201ENST00000604182 274 ntBASIC5.57□□□□□ -1.52
RARAP10276 MIR6864-201ENST00000617935 70 ntBASIC5.57□□□□□ -1.52
RARAP10276 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RARAP10276 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RARAP10276 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RARAP10276 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
RARAP10276 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.57□□□□□ -1.52
RARAP10276 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RARAP10276 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RARAP10276 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.56□□□□□ -1.52
RARAP10276 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RARAP10276 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RARAP10276 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RARAP10276 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RARAP10276 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 RNA5SP335-201ENST00000363817 110 ntBASIC5.56□□□□□ -1.52
RARAP10276 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 Y_RNA.512-201ENST00000384518 102 ntBASIC5.56□□□□□ -1.52
RARAP10276 AL445189.1-201ENST00000405722 338 ntBASIC5.56□□□□□ -1.52
RARAP10276 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.56□□□□□ -1.52
RARAP10276 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.56□□□□□ -1.52
RARAP10276 AL590632.1-201ENST00000424289 371 ntBASIC5.56□□□□□ -1.52
RARAP10276 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.56□□□□□ -1.52
RARAP10276 CALM2P2-201ENST00000428512 440 ntBASIC5.56□□□□□ -1.52
RARAP10276 AC236972.1-201ENST00000433225 199 ntBASIC5.56□□□□□ -1.52
RARAP10276 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.56□□□□□ -1.52
RARAP10276 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.56□□□□□ -1.52
RARAP10276 GAPDHP25-201ENST00000447061 1001 ntBASIC5.56□□□□□ -1.52
RARAP10276 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.56□□□□□ -1.52
RARAP10276 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.56□□□□□ -1.52
RARAP10276 AC104472.2-201ENST00000469035 601 ntBASIC5.56□□□□□ -1.52
RARAP10276 AC100832.1-201ENST00000471945 383 ntBASIC5.56□□□□□ -1.52
RARAP10276 RPL22P13-201ENST00000493291 347 ntBASIC5.56□□□□□ -1.52
RARAP10276 RPS24P16-201ENST00000497294 392 ntBASIC5.56□□□□□ -1.52
RARAP10276 RN7SL466P-201ENST00000497546 295 ntBASIC5.56□□□□□ -1.52
RARAP10276 HIGD1AP14-201ENST00000507617 282 ntBASIC5.56□□□□□ -1.52
RARAP10276 RBBP4P6-201ENST00000508098 202 ntBASIC5.56□□□□□ -1.52
RARAP10276 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.56□□□□□ -1.52
RARAP10276 RNU6-1069P-201ENST00000516612 133 ntBASIC5.56□□□□□ -1.52
RARAP10276 Y_RNA.721-201ENST00000517207 102 ntBASIC5.56□□□□□ -1.52
RARAP10276 RANP3-201ENST00000530970 276 ntBASIC5.56□□□□□ -1.52
RARAP10276 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.56□□□□□ -1.52
RARAP10276 MIR4472-2-201ENST00000582069 67 ntBASIC5.56□□□□□ -1.52
RARAP10276 MIR3941-201ENST00000582572 103 ntBASIC5.56□□□□□ -1.52
RARAP10276 AC008521.1-201ENST00000587471 187 ntBASIC5.56□□□□□ -1.52
RARAP10276 U2.17-201ENST00000611454 95 ntBASIC5.56□□□□□ -1.52
RARAP10276 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.56□□□□□ -1.52
RARAP10276 EXOC5P1-201ENST00000510543 1969 ntBASIC5.56□□□□□ -1.52
RARAP10276 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.56□□□□□ -1.52
RARAP10276 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
RARAP10276 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RARAP10276 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RARAP10276 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.56□□□□□ -1.52
RARAP10276 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RARAP10276 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RARAP10276 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
RARAP10276 PROS2P-201ENST00000474651 1951 ntBASIC5.55□□□□□ -1.52
RARAP10276 AL450345.1-202ENST00000605741 3881 ntBASIC5.55□□□□□ -1.52
RARAP10276 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
RARAP10276 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.55□□□□□ -1.52
RARAP10276 RNU6-128P-201ENST00000383976 107 ntBASIC5.55□□□□□ -1.52
RARAP10276 Y_RNA.428-201ENST00000384078 102 ntBASIC5.55□□□□□ -1.52
RARAP10276 U3.29-201ENST00000391296 212 ntBASIC5.55□□□□□ -1.52
RARAP10276 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RARAP10276 AL583834.1-201ENST00000406943 343 ntBASIC5.55□□□□□ -1.52
RARAP10276 RNU2-21P-201ENST00000410368 188 ntBASIC5.55□□□□□ -1.52
RARAP10276 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.55□□□□□ -1.52
RARAP10276 REREP1Y-201ENST00000422655 198 ntBASIC5.55□□□□□ -1.52
RARAP10276 RPL7P37-201ENST00000425095 738 ntBASIC5.55□□□□□ -1.52
RARAP10276 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.55□□□□□ -1.52
RARAP10276 REREP2Y-201ENST00000439103 200 ntBASIC5.55□□□□□ -1.52
RARAP10276 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RARAP10276 Z95327.1-201ENST00000446082 482 ntBASIC5.55□□□□□ -1.52
RARAP10276 AC005008.1-201ENST00000456151 612 ntBASIC5.55□□□□□ -1.52
RARAP10276 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.55□□□□□ -1.52
RARAP10276 AC135721.1-201ENST00000497954 479 ntBASIC5.55□□□□□ -1.52
RARAP10276 snoU109.6-201ENST00000516831 118 ntBASIC5.55□□□□□ -1.52
RARAP10276 SNORD116.3-201ENST00000517176 78 ntBASIC5.55□□□□□ -1.52
RARAP10276 AC105031.1-201ENST00000518550 476 ntBASIC5.55□□□□□ -1.52
RARAP10276 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RARAP10276 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.55□□□□□ -1.52
RARAP10276 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.55□□□□□ -1.52
RARAP10276 AC114947.2-201ENST00000565748 2125 ntBASIC5.55□□□□□ -1.52
RARAP10276 AC022884.2-201ENST00000578535 580 ntBASIC5.55□□□□□ -1.52
RARAP10276 NF1P5-201ENST00000588287 448 ntBASIC5.55□□□□□ -1.52
RARAP10276 AL512605.2-201ENST00000592972 256 ntBASIC5.55□□□□□ -1.52
RARAP10276 MIR8080-201ENST00000622224 89 ntBASIC5.55□□□□□ -1.52
RARAP10276 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.55□□□□□ -1.52
RARAP10276 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.55□□□□□ -1.52
RARAP10276 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.55□□□□□ -1.52
RARAP10276 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms