Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MTCYBP19-201ENST00000517463 1124 ntBASIC1.24□□□□□ -2.21
APOBP04114 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
APOBP04114 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.24□□□□□ -2.21
APOBP04114 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.24□□□□□ -2.21
APOBP04114 PSMA6P4-201ENST00000603247 718 ntBASIC1.24□□□□□ -2.21
APOBP04114 AC009831.4-201ENST00000620744 325 ntBASIC1.24□□□□□ -2.21
APOBP04114 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
APOBP04114 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
APOBP04114 DHFRP5-201ENST00000406944 564 ntBASIC1.23□□□□□ -2.21
APOBP04114 AC012360.2-201ENST00000609349 391 ntBASIC1.23□□□□□ -2.21
APOBP04114 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.23□□□□□ -2.21
APOBP04114 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
APOBP04114 RNY1-201ENST00000364228 113 ntBASIC1.23□□□□□ -2.21
APOBP04114 MTND4P13-201ENST00000402078 1023 ntBASIC1.23□□□□□ -2.21
APOBP04114 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.23□□□□□ -2.21
APOBP04114 AC060766.3-201ENST00000591442 263 ntBASIC1.23□□□□□ -2.21
APOBP04114 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.23□□□□□ -2.21
APOBP04114 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.23□□□□□ -2.21
APOBP04114 MIR6504-201ENST00000613520 61 ntBASIC1.23□□□□□ -2.21
APOBP04114 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
APOBP04114 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
APOBP04114 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.23□□□□□ -2.21
APOBP04114 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.23□□□□□ -2.21
APOBP04114 YWHAZP7-201ENST00000436906 631 ntBASIC1.23□□□□□ -2.21
APOBP04114 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
APOBP04114 AC011352.3-201ENST00000505162 593 ntBASIC1.23□□□□□ -2.21
APOBP04114 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.23□□□□□ -2.21
APOBP04114 AC091834.1-201ENST00000614543 472 ntBASIC1.23□□□□□ -2.21
APOBP04114 MIR6132-201ENST00000622083 109 ntBASIC1.23□□□□□ -2.21
APOBP04114 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
APOBP04114 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
APOBP04114 EXOC5P1-201ENST00000510543 1969 ntBASIC1.23□□□□□ -2.21
APOBP04114 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.23□□□□□ -2.21
APOBP04114 SNORD114-26-201ENST00000363543 72 ntBASIC1.23□□□□□ -2.21
APOBP04114 Y_RNA.374-201ENST00000365606 101 ntBASIC1.23□□□□□ -2.21
APOBP04114 RNU4-74P-201ENST00000411280 161 ntBASIC1.23□□□□□ -2.21
APOBP04114 RPL7P37-201ENST00000425095 738 ntBASIC1.23□□□□□ -2.21
APOBP04114 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.23□□□□□ -2.21
APOBP04114 SDR42E1P3-201ENST00000438345 502 ntBASIC1.23□□□□□ -2.21
APOBP04114 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.23□□□□□ -2.21
APOBP04114 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.23□□□□□ -2.21
APOBP04114 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.22□□□□□ -2.21
APOBP04114 RPS27P5-201ENST00000444247 244 ntBASIC1.22□□□□□ -2.21
APOBP04114 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
APOBP04114 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.22□□□□□ -2.21
APOBP04114 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.22□□□□□ -2.21
APOBP04114 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.22□□□□□ -2.21
APOBP04114 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.22□□□□□ -2.21
APOBP04114 BX248123.2-201ENST00000606318 124 ntBASIC1.22□□□□□ -2.21
APOBP04114 MIR8081-201ENST00000611533 95 ntBASIC1.22□□□□□ -2.21
APOBP04114 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.22□□□□□ -2.21
APOBP04114 AL353748.2-201ENST00000622148 471 ntBASIC1.22□□□□□ -2.21
APOBP04114 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
APOBP04114 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
APOBP04114 RNU1-51P-201ENST00000365345 176 ntBASIC1.22□□□□□ -2.21
APOBP04114 AC008173.1-201ENST00000418901 264 ntBASIC1.22□□□□□ -2.21
APOBP04114 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.22□□□□□ -2.21
APOBP04114 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.22□□□□□ -2.21
APOBP04114 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.22□□□□□ -2.21
APOBP04114 MTCO3P13-201ENST00000577757 781 ntBASIC1.22□□□□□ -2.21
APOBP04114 AC073387.2-201ENST00000604797 784 ntBASIC1.22□□□□□ -2.21
APOBP04114 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
APOBP04114 AL627390.1-201ENST00000396055 340 ntBASIC1.22□□□□□ -2.21
APOBP04114 RPL5P13-201ENST00000462840 709 ntBASIC1.22□□□□□ -2.21
APOBP04114 AL121594.1-201ENST00000475906 575 ntBASIC1.22□□□□□ -2.21
APOBP04114 HMGB3P15-201ENST00000507326 574 ntBASIC1.22□□□□□ -2.21
APOBP04114 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.22□□□□□ -2.21
APOBP04114 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.22□□□□□ -2.21
APOBP04114 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
APOBP04114 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
APOBP04114 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
APOBP04114 AIMP1P1-201ENST00000418670 937 ntBASIC1.22□□□□□ -2.21
APOBP04114 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
APOBP04114 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.22□□□□□ -2.21
APOBP04114 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.22□□□□□ -2.21
APOBP04114 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
APOBP04114 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.22□□□□□ -2.21
APOBP04114 AC131902.3-201ENST00000611767 581 ntBASIC1.22□□□□□ -2.21
APOBP04114 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.21□□□□□ -2.21
APOBP04114 CDC27P2-201ENST00000425026 1922 ntBASIC1.21□□□□□ -2.21
APOBP04114 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
APOBP04114 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
APOBP04114 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 MIR613-201ENST00000385248 95 ntBASIC1.21□□□□□ -2.22
APOBP04114 AC027124.2-201ENST00000428249 105 ntBASIC1.21□□□□□ -2.22
APOBP04114 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.21□□□□□ -2.22
APOBP04114 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 AC135721.1-201ENST00000497954 479 ntBASIC1.21□□□□□ -2.22
APOBP04114 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.21□□□□□ -2.22
APOBP04114 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.21□□□□□ -2.22
APOBP04114 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.21□□□□□ -2.22
APOBP04114 AC110588.1-201ENST00000559699 137 ntBASIC1.21□□□□□ -2.22
APOBP04114 AL110115.1-201ENST00000614396 364 ntBASIC1.21□□□□□ -2.22
APOBP04114 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.21□□□□□ -2.22
APOBP04114 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
APOBP04114 GSTA12P-201ENST00000402398 508 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms