Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC000041.1-201ENST00000439655 175 ntBASIC2.17□□□□□ -2.06
APOC1P02654 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.17□□□□□ -2.06
APOC1P02654 IFNA11P-201ENST00000446352 526 ntBASIC2.17□□□□□ -2.06
APOC1P02654 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.17□□□□□ -2.06
APOC1P02654 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.17□□□□□ -2.06
APOC1P02654 RPL5P13-201ENST00000462840 709 ntBASIC2.17□□□□□ -2.06
APOC1P02654 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.17□□□□□ -2.06
APOC1P02654 AL135752.1-201ENST00000479477 471 ntBASIC2.17□□□□□ -2.06
APOC1P02654 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
APOC1P02654 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.17□□□□□ -2.06
APOC1P02654 AC026801.2-201ENST00000515352 425 ntBASIC2.17□□□□□ -2.06
APOC1P02654 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.17□□□□□ -2.06
APOC1P02654 RPS3AP23-202ENST00000574601 686 ntBASIC2.17□□□□□ -2.06
APOC1P02654 MIR7106-201ENST00000612419 65 ntBASIC2.17□□□□□ -2.06
APOC1P02654 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
APOC1P02654 AL049780.3-201ENST00000624612 1583 ntBASIC2.16□□□□□ -2.06
APOC1P02654 ZNF833P-201ENST00000424938 1494 ntBASIC2.16□□□□□ -2.06
APOC1P02654 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOC1P02654 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
APOC1P02654 Y_RNA.333-201ENST00000365274 102 ntBASIC2.16□□□□□ -2.06
APOC1P02654 U8.8-201ENST00000365399 135 ntBASIC2.16□□□□□ -2.06
APOC1P02654 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
APOC1P02654 MIR196B-201ENST00000384852 84 ntBASIC2.16□□□□□ -2.06
APOC1P02654 SNORA48.2-201ENST00000390926 124 ntBASIC2.16□□□□□ -2.06
APOC1P02654 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
APOC1P02654 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.16□□□□□ -2.06
APOC1P02654 HMGN2P38-201ENST00000423806 265 ntBASIC2.16□□□□□ -2.06
APOC1P02654 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.16□□□□□ -2.06
APOC1P02654 UBE2V2P4-201ENST00000447495 259 ntBASIC2.16□□□□□ -2.06
APOC1P02654 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.16□□□□□ -2.06
APOC1P02654 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
APOC1P02654 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.16□□□□□ -2.06
APOC1P02654 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.16□□□□□ -2.06
APOC1P02654 AC016550.3-201ENST00000515706 767 ntBASIC2.16□□□□□ -2.06
APOC1P02654 RN7SKP24-201ENST00000515888 284 ntBASIC2.16□□□□□ -2.06
APOC1P02654 RNU6-319P-201ENST00000516025 108 ntBASIC2.16□□□□□ -2.06
APOC1P02654 RNA5SP24-201ENST00000516478 95 ntBASIC2.16□□□□□ -2.06
APOC1P02654 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.16□□□□□ -2.06
APOC1P02654 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.16□□□□□ -2.06
APOC1P02654 AC025281.1-201ENST00000567026 265 ntBASIC2.16□□□□□ -2.06
APOC1P02654 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.16□□□□□ -2.06
APOC1P02654 AL356280.1-201ENST00000603614 379 ntBASIC2.16□□□□□ -2.06
APOC1P02654 AL035413.2-201ENST00000604801 525 ntBASIC2.16□□□□□ -2.06
APOC1P02654 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOC1P02654 AC095031.1-201ENST00000623685 672 ntBASIC2.16□□□□□ -2.06
APOC1P02654 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.16□□□□□ -2.06
APOC1P02654 ZNF658B-202ENST00000615961 3375 ntBASIC2.16□□□□□ -2.06
APOC1P02654 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOC1P02654 SNORA70.4-201ENST00000365509 134 ntBASIC2.15□□□□□ -2.07
APOC1P02654 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
APOC1P02654 SNORA11-201ENST00000408789 128 ntBASIC2.15□□□□□ -2.07
APOC1P02654 RNA5SP184-201ENST00000411071 108 ntBASIC2.15□□□□□ -2.07
APOC1P02654 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.15□□□□□ -2.07
APOC1P02654 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.15□□□□□ -2.07
APOC1P02654 RPL7P44-201ENST00000424827 742 ntBASIC2.15□□□□□ -2.07
APOC1P02654 AL513328.1-201ENST00000446460 224 ntBASIC2.15□□□□□ -2.07
APOC1P02654 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.15□□□□□ -2.07
APOC1P02654 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.15□□□□□ -2.07
APOC1P02654 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.15□□□□□ -2.07
APOC1P02654 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.15□□□□□ -2.07
APOC1P02654 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.15□□□□□ -2.07
APOC1P02654 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.15□□□□□ -2.07
APOC1P02654 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.15□□□□□ -2.07
APOC1P02654 LARP7P3-201ENST00000579888 337 ntBASIC2.15□□□□□ -2.07
APOC1P02654 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.15□□□□□ -2.07
APOC1P02654 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
APOC1P02654 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.15□□□□□ -2.07
APOC1P02654 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.15□□□□□ -2.07
APOC1P02654 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.15□□□□□ -2.07
APOC1P02654 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
APOC1P02654 AC104446.1-201ENST00000613728 1321 ntBASIC2.15□□□□□ -2.07
APOC1P02654 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.15□□□□□ -2.07
APOC1P02654 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOC1P02654 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
APOC1P02654 SNORA1.3-201ENST00000384676 136 ntBASIC2.14□□□□□ -2.07
APOC1P02654 MIR34A-201ENST00000385130 110 ntBASIC2.14□□□□□ -2.07
APOC1P02654 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.14□□□□□ -2.07
APOC1P02654 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.14□□□□□ -2.07
APOC1P02654 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOC1P02654 AL512504.1-201ENST00000415494 778 ntBASIC2.14□□□□□ -2.07
APOC1P02654 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.14□□□□□ -2.07
APOC1P02654 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
APOC1P02654 DPPA3P1-201ENST00000448050 469 ntBASIC2.14□□□□□ -2.07
APOC1P02654 FAM172BP-201ENST00000487497 1089 ntBASIC2.14□□□□□ -2.07
APOC1P02654 OR5BM1P-201ENST00000512021 366 ntBASIC2.14□□□□□ -2.07
APOC1P02654 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.14□□□□□ -2.07
APOC1P02654 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.14□□□□□ -2.07
APOC1P02654 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.14□□□□□ -2.07
APOC1P02654 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.14□□□□□ -2.07
APOC1P02654 AC005000.2-201ENST00000605468 310 ntBASIC2.14□□□□□ -2.07
APOC1P02654 AC090525.3-201ENST00000605601 189 ntBASIC2.14□□□□□ -2.07
APOC1P02654 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.14□□□□□ -2.07
APOC1P02654 AC009090.3-201ENST00000616553 565 ntBASIC2.14□□□□□ -2.07
APOC1P02654 AL031601.2-202ENST00000622650 282 ntBASIC2.14□□□□□ -2.07
APOC1P02654 CYP3A51P-201ENST00000633513 256 ntBASIC2.14□□□□□ -2.07
APOC1P02654 AC009902.3-201ENST00000606235 2172 ntBASIC2.14□□□□□ -2.07
APOC1P02654 AL049737.1-201ENST00000413920 1403 ntBASIC2.14□□□□□ -2.07
APOC1P02654 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
APOC1P02654 AC090740.1-201ENST00000623193 2262 ntBASIC2.14□□□□□ -2.07
APOC1P02654 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms