Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.59□□□□□ -1.67
CNOT4O95628 MIR6839-201ENST00000620425 113 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 AC091953.3-201ENST00000623220 236 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 AC067931.1-201ENST00000624190 671 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 CYP3A51P-201ENST00000633513 256 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 AL391684.1-202ENST00000641293 1636 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 AC092376.2-201ENST00000622621 4116 ntBASIC4.59□□□□□ -1.68
CNOT4O95628 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
CNOT4O95628 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNOT4O95628 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.59□□□□□ -1.68
CNOT4O95628 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.58□□□□□ -1.68
CNOT4O95628 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CNOT4O95628 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.58□□□□□ -1.68
CNOT4O95628 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 LARP1BP1-201ENST00000506036 1359 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 ASNSP3-201ENST00000451989 1306 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 Y_RNA.145-201ENST00000363527 102 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 Y_RNA.202-201ENST00000364083 110 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 Y_RNA.231-201ENST00000364358 102 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 RNU6-474P-201ENST00000384243 107 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 SNORD37.1-201ENST00000390968 65 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 RNA5SP241-201ENST00000391326 114 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 FAR2P2-201ENST00000413041 594 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.58□□□□□ -1.68
CNOT4O95628 FAR2P4-202ENST00000425399 584 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC009238.2-201ENST00000431026 355 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.58□□□□□ -1.68
CNOT4O95628 AC127537.2-201ENST00000439258 465 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC073415.1-201ENST00000449240 153 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.58□□□□□ -1.68
CNOT4O95628 Y_RNA.631-201ENST00000459607 101 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 RN7SL814P-201ENST00000487715 300 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.58□□□□□ -1.68
CNOT4O95628 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.58□□□□□ -1.68
CNOT4O95628 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.58□□□□□ -1.68
CNOT4O95628 MTCO3P44-201ENST00000510977 541 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.58□□□□□ -1.68
CNOT4O95628 RN7SKP147-201ENST00000517154 244 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.58□□□□□ -1.68
CNOT4O95628 AP003497.1-201ENST00000528472 562 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.58□□□□□ -1.68
CNOT4O95628 GSTP1P1-201ENST00000548078 319 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 LSM3P2-201ENST00000551246 273 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC026464.5-201ENST00000562497 722 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.58□□□□□ -1.68
CNOT4O95628 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 AC006116.10-201ENST00000591836 581 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.58□□□□□ -1.68
CNOT4O95628 SNRPGP17-201ENST00000603780 214 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.58□□□□□ -1.68
CNOT4O95628 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC130324.3-201ENST00000614165 542 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 MIR6810-201ENST00000622701 70 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 AC138305.3-201ENST00000624988 240 ntBASIC4.58□□□□□ -1.68
CNOT4O95628 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CNOT4O95628 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.58□□□□□ -1.68
CNOT4O95628 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNOT4O95628 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNOT4O95628 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.57□□□□□ -1.68
CNOT4O95628 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.57□□□□□ -1.68
CNOT4O95628 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CNOT4O95628 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNOT4O95628 AC073343.1-201ENST00000328239 651 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNOT4O95628 MIR369-201ENST00000362155 70 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 Y_RNA.100-201ENST00000363141 102 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 RNU6-339P-201ENST00000384310 107 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 MIR141-201ENST00000384975 95 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AL078599.1-201ENST00000402075 293 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 Y_RNA.615-201ENST00000410769 117 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AC016397.1-201ENST00000412463 242 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.57□□□□□ -1.68
CNOT4O95628 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.57□□□□□ -1.68
CNOT4O95628 MTCO2P27-201ENST00000420740 428 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AL451054.2-201ENST00000420896 202 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms