Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 MTATP6P2-201ENST00000603319 678 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AC024595.1-201ENST00000623088 387 ntBASIC2.93□□□□□ -1.94
CTDNEP1O95476 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
CTDNEP1O95476 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTDNEP1O95476 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 MIR518C-201ENST00000384822 101 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 MIR483-201ENST00000385070 76 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 MTCYBP24-201ENST00000420387 1106 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC093422.3-201ENST00000428506 305 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AL109933.2-201ENST00000452651 260 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 DNAJC19P8-201ENST00000452887 259 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 GTF2IP12-201ENST00000456547 356 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 HMGN2P13-201ENST00000476476 274 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC016550.1-201ENST00000505348 785 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 RPL7L1P13-201ENST00000511702 739 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC026412.2-201ENST00000512270 1075 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC023825.1-201ENST00000566704 1030 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC090666.1-201ENST00000578241 445 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC133794.1-201ENST00000602731 914 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AL390240.1-201ENST00000612950 384 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC078880.5-201ENST00000617845 421 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 U73479.1-201ENST00000618062 168 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AP000943.4-201ENST00000622912 357 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC103988.1-201ENST00000566382 2177 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 AC069528.2-201ENST00000624849 1991 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CTDNEP1O95476 AL355578.1-201ENST00000607405 1328 ntBASIC2.92□□□□□ -1.94
CTDNEP1O95476 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC092447.7-201ENST00000422212 1621 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 RNA5SP456-201ENST00000364002 114 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 RNU1-101P-201ENST00000391171 127 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC092745.2-202ENST00000411880 369 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC069282.1-201ENST00000411911 526 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 NUP35P1-201ENST00000422734 947 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC019097.1-201ENST00000424783 735 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC063976.3-201ENST00000426849 329 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 DEFB130D-201ENST00000426866 237 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 FABP5P3-201ENST00000437960 408 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC093392.2-201ENST00000450682 337 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 MRPL35P4-201ENST00000453682 566 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AP000705.1-201ENST00000454567 350 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 RPS3P1-201ENST00000456781 192 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 MTCO2P32-201ENST00000514865 403 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC068339.2-201ENST00000534395 618 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 MIR4789-201ENST00000577469 82 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 AL356575.1-201ENST00000603008 283 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 YWHAQP7-201ENST00000603536 658 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AL035413.2-201ENST00000604801 525 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC092953.2-201ENST00000608000 699 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 MIR7106-201ENST00000612419 65 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 AC093875.1-201ENST00000623688 504 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 PABPC1P7-201ENST00000413177 1513 ntBASIC2.91□□□□□ -1.94
CTDNEP1O95476 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CTDNEP1O95476 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CTDNEP1O95476 SEC63P2-201ENST00000503863 1939 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTDNEP1O95476 RNU6-468P-201ENST00000384003 109 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 MIR27B-201ENST00000385129 97 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AP002784.2-201ENST00000397300 549 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 PRRC2CP1-201ENST00000404428 159 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 RPL21P66-201ENST00000426566 466 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 HSFY3P-201ENST00000444242 1191 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms